Job Description A0PJZ0 Confidence 99.67% Date Wed May 9 17:33:58 BST 2012 Rank 34 Aligned Residues 128 % Identity 22% Template c1ympA_ PDB info PDB header:transcription Chain: A: PDB Molecule:notch 1 protein; PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold Resolution 2.20 Å

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		24	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	S	G	Y	R	I	R	Y	S	.	E	L	Q	K	I	H	K	A	A	V	K	G	D	A	A	E	M	E	R	C	L	A	R	R	S	G	D	L	D	A	L	D	K	Q	H	R	T	A	L	H	L	A	C	A	S	G	H	V	K	V	V	T	L	L	V	N	R	K	C	Q	I	D	I	Y	D	K	E	N	R	T
Query Conservation											.
Alig confidence											.																						.
Template Conservation																																	.
Template Sequence		A	T	D	L	D	A	R	M	H	D	G	T	T	P	L	I	L	A	A	R	L	A	L	E	G	M	L	E	D	L	I	.	N	S	H	A	D	V	N	A	V	D	D	L	G	K	S	A	L	H	W	A	A	A	V	N	N	V	D	A	A	V	V	L	L	K	N	G	A	N	K	D	M	Q	N	N	K	E	E	T
Template Known Secondary structure		G	G	G						T	T												T		T	T							.		T	T			T	T				T	T	S										T	T											T	T			T	T				T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	Q	A	V	H	C	Q	E	E	A	C	A	V	I	L	L	E	H	G	A	N	P	N	L	K	D	I	Y	G	N	T	A	L	H	Y	A	V	Y	S	E	S	T	S	L	A	E	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	F	L	A	A	R	E	G	S	Y	E	T	A	K	V	L	L	D	H	F	A	N	R	D	I	T	D	H	M	D	R	L	P	R	D	I	A	Q	E	R	M	H	H	D	I	V	R	L	L
Template Known Secondary structure										T											T	T			T	T				T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions