Job Description A0PJZ0 Confidence 99.87% Date Wed May 9 17:33:58 BST 2012 Rank 6 Aligned Residues 162 % Identity 20% Template c1sw6A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:regulatory protein swi6; PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20											.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.													.															.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.													.															.	.	.
Query Sequence		M	K	L	F	G	F	R	S	R	R	G	Q	T	V	L	G	S	I	D	H	.	.	.	.	.	.	.	.	.	.	L	Y	T	G	S	G	Y	R	I	R	Y	S	.	E	L	Q	K	I	H	K	A	A	V	K	G	D	A	.	.	.	A	E	M	E	R	C	L	A	R	R	S	G	D	L	D	A	L	D	K	Q
Query Conservation																						.	.	.	.	.	.	.	.	.	.													.															.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.													.															.	.	.
Template Conservation
Template Sequence		L	N	L	N	I	P	V	D	E	H	G	N	T	P	L	H	W	L	T	S	I	A	N	L	E	L	V	K	H	L	V	K	H	G	S	N	R	L	Y	G	D	N	M	G	E	S	C	L	V	K	A	V	K	S	V	N	N	Y	D	S	G	T	F	E	A	L	L	D	Y	L	Y	P	C	L	I	L	E	D	S	M
Template Known Secondary structure				S		S			S	T	T											T	T											T	T			T	T	B			T	T											S	S					T	T										G	G	G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		H	R	T	A	L	H	L	A	C	A	S	G	H	V	K	V	V	T	L	L	V	N	R	K	C	Q	I	D	I	.	.	Y	D	K	E	N	R	T	P	L	I	Q	A	V	H	C	Q	E	E	A	C	A	V	I	L	L	E	H	G	A	N	P	N	L	K	D	I	Y	G	N	T	A	L	H	Y	A	V	Y	S	E
Query Conservation																															.	.
Alig confidence																															.	.																										.	.
Template Conservation																																																										.	.
Template Sequence		N	R	T	I	L	H	H	I	I	I	T	S	G	M	T	G	C	S	A	A	A	K	Y	Y	L	D	I	L	M	G	W	I	V	K	K	Q	N	R	P	I	Q	S	G	D	S	I	L	E	N	L	D	L	K	W	I	I	.	.	A	N	M	L	N	A	Q	D	S	N	G	D	T	C	L	N	I	A	A	R	L	G
Template Known Secondary structure														T	S	T	T																			G	G	G														S						.	.			T	T	T				T	T	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.			.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	L	A	E	K	L	L	F	H	G	E	N	I	E	A	L	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	S	I	V	D	A	L	L	D	Y	G	A	D	P	F	I	A	N	K
Template Known Secondary structure												T	T			T	T				T
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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