Email l.a.kelley@imperial.ac.uk Description A0PJZ3 Date Sat Jun 16 10:31:38 BST 2012 Unique Job ID eab9cd653f9ed7b9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1ga8A_ 100.0 20 PDB header:transferase Chain: A: PDB Molecule:galactosyl transferase lgtc; PDBTitle: crystal structure of galacosyltransferase lgtc in complex2 with donor and acceptor sugar analogs. 2 d1ga8a_ 100.0 20 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Galactosyltransferase LgtC 3 c3tztB_ 99.9 19 PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase family 8; PDBTitle: the structure of a protein in glycosyl transferase family 8 from2 anaerococcus prevotii. 4 c1zcyA_ 99.9 16 PDB header:transferase Chain: A: PDB Molecule:glycogenin-1; PDBTitle: apo form of a mutant of glycogenin in which asp159 is replaced by ser 5 d1ll2a_ 99.9 16 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Glycogenin 6 c1zctB_ 99.9 16 PDB header:transferase Chain: B: PDB Molecule:glycogenin-1; PDBTitle: structure of glycogenin truncated at residue 270 in a2 complex with udp 7 d1o7qa_ 96.6 17 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:alpha-1,3-galactosyltransferase-like 8 d1lzia_ 94.8 16 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:alpha-1,3-galactosyltransferase-like 9 c2vg2C_ 84.0 25 PDB header:transferase Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase; PDBTitle: rv2361 with ipp 10 d1qg8a_ 56.5 11 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Spore coat polysaccharide biosynthesis protein SpsA 11 c2z86D_ 44.4 11 PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp 12 c3bcvA_ 38.0 10 PDB header:transferase Chain: A: PDB Molecule:putative glycosyltransferase protein; PDBTitle: crystal structure of a putative glycosyltransferase from bacteroides2 fragilis 13 c2x5sB_ 34.4 15 PDB header:transferase Chain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase; PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state. 14 d2py5a2 29.8 26 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 15 c3oj6C_ 27.5 15 PDB header:hydrolase Chain: C: PDB Molecule:blasticidin-s deaminase; PDBTitle: crystal structure of blasticidin s deaminase from coccidioides immitis 16 d2bmwa2 26.0 12 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 17 d1wn7a2 24.1 28 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 18 d1tvca2 21.7 12 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like 19 c4a69A_ 20.6 30 PDB header:transcription Chain: A: PDB Molecule:histone deacetylase 3,; PDBTitle: structure of hdac3 bound to corepressor and inositol tetraphosphate 20 c3ckvA_ 20.4 11 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a mycobacterial protein 21 d1wiwa_ not modelled 19.0 45 Fold:SIS domain Superfamily:SIS domain Family:double-SIS domain 22 d1fnda2 not modelled 18.5 12 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 23 d2d30a1 not modelled 17.8 20 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 24 c3dmoD_ not modelled 17.5 17 PDB header:hydrolase Chain: D: PDB Molecule:cytidine deaminase; PDBTitle: 1.6 a crystal structure of cytidine deaminase from2 burkholderia pseudomallei 25 d1gawa2 not modelled 17.2 13 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 26 c3ew8A_ not modelled 17.1 30 PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 8; PDBTitle: crystal structure analysis of human hdac8 d101l variant 27 c3maxB_ not modelled 17.0 35 PDB header:hydrolase Chain: B: PDB Molecule:histone deacetylase 2; PDBTitle: crystal structure of human hdac2 complexed with an n-(2-aminophenyl)2 benzamide 28 c2w7tA_ not modelled 16.6 19 PDB header:ligase Chain: A: PDB Molecule:putative cytidine triphosphate synthase; PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin 29 d1ub2a1 not modelled 16.3 14 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 30 c2ffuA_ not modelled 15.9 14 PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2 31 c3b8fB_ not modelled 15.8 14 PDB header:hydrolase Chain: B: PDB Molecule:putative blasticidin s deaminase; PDBTitle: crystal structure of the cytidine deaminase from bacillus anthracis 32 d1qhta2 not modelled 15.7 29 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 33 d1qfza2 not modelled 15.5 12 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 34 c2vwkA_ not modelled 15.3 32 PDB header:dna replication Chain: A: PDB Molecule:dna polymerase; PDBTitle: uracil recognition in archaeal dna polymerases captured by2 x-ray crystallography. v93q polymerase variant 35 c1omxB_ not modelled 14.7 9 PDB header:transferase Chain: B: PDB Molecule:alpha-1,4-n-acetylhexosaminyltransferase extl2; PDBTitle: crystal structure of mouse alpha-1,4-n-2 acetylhexosaminyltransferase (extl2) 36 c2p73A_ not modelled 14.5 20 PDB header:transferase Chain: A: PDB Molecule:putative glycosyltransferase (mannosyltransferase) involved PDBTitle: crystal structure of a glycosyltransferase involved in the2 glycosylation of the major capsid of pbcv-1 37 d1d5aa2 not modelled 14.5 28 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 38 c1xhbA_ not modelled 14.2 13 PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1; PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1 39 d1ep3b2 not modelled 14.1 5 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Dihydroorotate dehydrogenase B, PyrK subunit 40 d1p35a_ not modelled 13.7 26 Fold:Baculovirus p35 protein Superfamily:Baculovirus p35 protein Family:Baculovirus p35 protein 41 c1d5aA_ not modelled 13.4 28 PDB header:transferase Chain: A: PDB Molecule:protein (dna polymerase); PDBTitle: crystal structure of an archaebacterial dna polymerase2 d.tok. deposition of second native structure at 2.43 angstrom 42 d2piaa2 not modelled 13.2 20 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like 43 d1s5ja2 not modelled 12.9 62 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 44 c2ex3I_ not modelled 12.8 26 PDB header:transferase/replication Chain: I: PDB Molecule:dna polymerase; PDBTitle: bacteriophage phi29 dna polymerase bound to terminal protein 45 d1ddga2 not modelled 12.3 10 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:NADPH-cytochrome p450 reductase-like 46 c2doqD_ not modelled 12.3 31 PDB header:cell cycle Chain: D: PDB Molecule:sfi1p; PDBTitle: crystal structure of sfi1p/cdc31p complex 47 d3bl9a1 not modelled 12.2 20 Fold:HIT-like Superfamily:HIT-like Family:mRNA decapping enzyme DcpS C-terminal domain 48 d2fr5a1 not modelled 12.2 20 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 49 c1fncA_ not modelled 12.1 11 PDB header:oxidoreductase (nadp+(a),ferredoxin(a)) Chain: A: PDB Molecule:ferredoxin-nadp+ reductase; PDBTitle: refined crystal structure of spinach ferredoxin reductase2 at 1.7 angstroms resolution: oxidized, reduced, and 2'-3 phospho-5'-amp bound states 50 d1xhba2 not modelled 11.7 10 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain 51 c4f7dA_ not modelled 11.3 8 PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: crystal structure of ferredoxin-nadp reductase from burkholderia2 thailandensis e264 52 d1qasa3 not modelled 11.1 27 Fold:TIM beta/alpha-barrel Superfamily:PLC-like phosphodiesterases Family:Mammalian PLC 53 d1uwza_ not modelled 10.9 27 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 54 d1omza_ not modelled 10.8 9 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:Exostosin 55 d2z3ga1 not modelled 10.2 11 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 56 c3bg3B_ not modelled 10.0 13 PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial; PDBTitle: crystal structure of human pyruvate carboxylase (missing2 the biotin carboxylase domain at the n-terminus) 57 d1j7ga_ not modelled 9.8 15 Fold:DTD-like Superfamily:DTD-like Family:DTD-like 58 d1pzta_ not modelled 9.6 16 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:beta 1,4 galactosyltransferase (b4GalT1) 59 d1c3pa_ not modelled 9.4 25 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Histone deacetylase, HDAC 60 d1r5ta_ not modelled 9.3 11 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 61 c2d7iA_ not modelled 9.2 13 PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ 62 d1mq0a_ not modelled 9.2 16 Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Cytidine deaminase 63 d1t64a_ not modelled 9.1 27 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Histone deacetylase, HDAC 64 d1cqxa3 not modelled 9.0 22 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Flavohemoglobin, C-terminal domain 65 d1tgoa2 not modelled 8.9 32 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 66 c4eh1A_ not modelled 8.8 8 PDB header:oxidoreductase Chain: A: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohem-like-fad/nad binding domain of2 nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 67 c2gv9B_ not modelled 8.3 29 PDB header:transferase Chain: B: PDB Molecule:dna polymerase; PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase 68 d1ih7a2 not modelled 8.3 38 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 69 c2vqqA_ not modelled 8.1 55 PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 4; PDBTitle: structure of hdac4 catalytic domain (a double cysteine-to-2 alanine mutant) bound to a trifluoromethylketone inhbitor 70 c2v8wA_ not modelled 7.9 21 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 4e; PDBTitle: crystallographic and mass spectrometric characterisation of2 eif4e with n7-cap derivatives 71 d1jkea_ not modelled 7.8 15 Fold:DTD-like Superfamily:DTD-like Family:DTD-like 72 d3c10a1 not modelled 7.7 45 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Histone deacetylase, HDAC 73 d1q8ia2 not modelled 7.6 17 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 74 c2j83B_ not modelled 7.5 19 PDB header:hydrolase Chain: B: PDB Molecule:ulilysin; PDBTitle: ulilysin metalloprotease in complex with batimastat. 75 c2j7pA_ not modelled 7.4 16 PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy 76 c2zjtB_ not modelled 7.3 60 PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of dna gyrase b' domain sheds lights on2 the mechanism for t-segment navigation 77 d2j07a2 not modelled 7.3 36 Fold:Cryptochrome/photolyase, N-terminal domain Superfamily:Cryptochrome/photolyase, N-terminal domain Family:Cryptochrome/photolyase, N-terminal domain 78 d1fo8a_ not modelled 7.3 12 Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:N-acetylglucosaminyltransferase I 79 d1yuaa2 not modelled 7.2 38 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Prokaryotic DNA topoisomerase I, a C-terminal fragment 80 d1u5tb1 not modelled 7.2 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 81 d2ccaa1 not modelled 7.2 15 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 82 c3anwB_ not modelled 7.1 19 PDB header:replication Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: a protein complex essential initiation of dna replication 83 c3fkqA_ not modelled 7.1 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ntrc-like two-domain protein; PDBTitle: crystal structure of ntrc-like two-domain protein (rer070207001320)2 from eubacterium rectale at 2.10 a resolution 84 c1txlA_ not modelled 7.0 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:metal-binding protein yoda; PDBTitle: crystal structure of metal-binding protein yoda from e.2 coli, pfam duf149 85 d1txla_ not modelled 7.0 26 Fold:Lipocalins Superfamily:Lipocalins Family:Hypothetical protein YodA 86 c2eixA_ not modelled 6.9 11 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of physarum polycephalum cytochrome b5 reductase 87 c3bg5C_ not modelled 6.9 16 PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase 88 c1cqxB_ not modelled 6.9 19 PDB header:lipid binding protein Chain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution 89 d1nowa1 not modelled 6.8 15 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-N-acetylhexosaminidase catalytic domain 90 d1mwva1 not modelled 6.5 18 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 91 d1rz3a_ not modelled 6.5 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Phosphoribulokinase/pantothenate kinase 92 c1s5jA_ not modelled 6.4 62 PDB header:transferase Chain: A: PDB Molecule:dna polymerase i; PDBTitle: insight in dna replication: the crystal structure of dna2 polymerase b1 from the archaeon sulfolobus solfataricus 93 d2ccva1 not modelled 6.3 7 Fold:HPA-like Superfamily:Agglutinin HPA-like Family:Agglutinin HPA-like 94 d1a8pa2 not modelled 6.2 10 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Reductases 95 c2k0mA_ not modelled 6.2 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the uncharacterized protein from2 rhodospirillum rubrum gene locus rru_a0810. northeast3 structural genomics target rrr43 96 c1qfjD_ not modelled 6.2 11 PDB header:oxidoreductase Chain: D: PDB Molecule:protein (flavin reductase); PDBTitle: crystal structure of nad(p)h:flavin oxidoreductase from escherichia2 coli 97 c2vldA_ not modelled 6.1 24 PDB header:hydrolase Chain: A: PDB Molecule:upf0286 protein pyrab01260; PDBTitle: crystal structure of a repair endonuclease from pyrococcus2 abyssi 98 d1rgoa1 not modelled 6.1 33 Fold:CCCH zinc finger Superfamily:CCCH zinc finger Family:CCCH zinc finger 99 c1y6gB_ not modelled 5.8 50 PDB header:transferase/dna Chain: B: PDB Molecule:dna alpha-glucosyltransferase; PDBTitle: alpha-glucosyltransferase in complex with udp and a 13_mer2 dna containing a hmu base at 2.8 a resolution