Job Description A0PJZ3 Confidence 11.66% Date Sat Jun 16 10:31:38 BST 2012 Rank 50 Aligned Residues 93 % Identity 10% Template d1xhba2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain Resolution 2.50

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		112	.	.	.	.	.	.	.	120	.	.		.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure													.					.																.										.	.	.	.
Query SS confidence													.					.																.										.	.	.	.
Query Sequence		L	A	V	V	A	C	G	N	R	L	E	.	E	T	L	V	.	M	L	K	S	A	V	L	F	S	H	R	K	I	Q	F	.	H	I	F	T	E	D	S	L	K	.	.	.	.	P	E	F	D	K	Q	L	R	Q	W	P	D	S	Y	T	K	K	F	E	H	R	I	Y	P	I	T	F	S	V	G	N	P	Q	E
Query Conservation													.					.																.										.	.	.	.
Alig confidence													.					.																.										.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.
Template Sequence		T	S	V	V	I	V	F	H	N	E	A	W	S	T	L	L	R	T	V	H	S	V	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	Y	V	K	K	L	K	V	P	V	H	V	I	R	M	E	.	.	.	.	.	.	.	.	.	Q	R	S	G
Template Known Secondary structure									S	S																S	S		G	G	G										S				G	G	G	T									S	S	S	S								S	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.										.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	K	L	F	K	P	C	A	A	Q	R	L	F	L	P	V	I	L	K	D	V	D	S	L	L	Y	V	D	T	D	V	L	F	L	R	P
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		L	I	R	A	R	L	K	G	.	.	.	.	.	.	.	.	A	A	V	S	R	G	Q	V	I	T	F	L	D	A	H	C	E	C	T	A	G
Template Known Secondary structure										.	.	.	.	.	.	.	.						S	S							S	S					T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions