Job Description A0PJZ3 Confidence 44.36% Date Sat Jun 16 10:31:38 BST 2012 Rank 11 Aligned Residues 167 % Identity 11% Template c2z86D_ PDB info PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp Resolution 2.40 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		L	A	V	V	A	C	G	N	R	L	E	E	T	L	.	V	M	L	K	S	A	V	L	F	S	H	R	K	I	Q	F	H	I	F	T	E	D	S	L	K	P	E	F	D	K	Q	L	R	Q	W	P	D	S	Y	T	K	K	F	E	H	R	I	Y	P	I	T	F	S	V	G	N	P	Q	E	W	K	K	L	F	K
Query Conservation																.
Alig confidence																.																	.																			.	.	.	.
Template Conservation																																	.																			.	.	.	.
Template Sequence		V	S	I	Y	I	P	A	Y	N	C	S	K	Y	I	V	R	C	V	E	S	A	L	N	Q	T	I	T	D	L	E	V	.	C	I	C	D	D	G	S	T	D	D	T	L	R	I	L	Q	E	H	.	.	.	.	Y	A	N	H	P	R	V	R	F	I	S	Q	K	N	K	G	I	G	S	A	S	N	T	A	V	R
Template Known Secondary structure									S	S		T	T	T										S		S			S				.						S		S	S	T									.	.	.	.		T	T		T	T
Template Predicted Secondary structure																																	.																			.	.	.	.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.					.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.
Predicted Secondary structure																															.																																													.	.	.	.	.
Query SS confidence																															.																																													.	.	.	.	.
Query Sequence		P	C	A	A	Q	R	L	F	L	P	V	I	L	K	D	V	D	S	L	L	Y	V	D	T	D	V	L	F	L	.	R	P	V	D	D	I	W	K	L	L	R	L	F	N	S	T	Q	L	A	A	M	A	P	E	H	E	I	P	K	I	G	W	Y	S	R	F	A	R	H	P	F	Y	G	S	.	.	.	.	.	A
Query Conservation																															.																																													.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																.																																													.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	.	.	.	.	.	.	.	.	.	.	.	.	R	G	F	Y	I	G	Q	L	D	S	D	D	F	L	E	P	D	A	V	E	L	C	L	D	E	F	R	K	D	L	S	L	A	C	V	Y	T	T	N	R	N	I	D	R	E	G	N	L	I	S	N	G	Y	N	W	P	I	Y	S	R	E	K	L	T	S	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.		S	S							T	T					T	T													T	T													T	T	S										S	S									S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		509	510													.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	N	S	G	V	M	L	M	N	L	T	R	I	R	S	T	Q	F	K	N	S	M	I	P	T	G	L	A	W	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	I	C	H	H	F	R	M	F	T	A	R	A	W	N	L	T	E	G	F	N	E	S	I	S	N	A	V	D	Y	D
Template Known Secondary structure						S											T	T	T		S		S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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