Job Description A0PJZ3 Confidence 34.43% Date Sat Jun 16 10:31:38 BST 2012 Rank 13 Aligned Residues 147 % Identity 15% Template c2x5sB_ PDB info PDB header:transferase Chain: B: PDB Molecule:mannose-1-phosphate guanylyltransferase; PDBTitle: crystal structure of t. maritima gdp-mannose2 pyrophosphorylase in apo state. Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		207	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250														.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query Sequence		D	S	L	L	Y	V	D	T	D	V	L	.	.	.	.	.	.	F	L	R	P	V	D	D	I	W	K	L	L	R	L	F	N	S	T	Q	L	A	A	M	A	P	E	H	E	I	P	K	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Y	S	R	F	A	R	H	P	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	V	L	V	L	P	A	D	H	R	I	P	D	T	K	K	F	W	K	T	V	K	K	A	L	D	A	L	E	K	Y	D	G	L	F	T	F	G	I	V	P	T	R	P	E	T	G	Y	G	Y	I	E	I	G	E	E	L	E	E	G	V	H	K	V	A	Q	F	R	E	K	P	D	L	E	T	A	K	K	F
Template Known Secondary structure									S	S		B																							S									S	S			S	S	S											T	T										S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.															.	.	.
Predicted Secondary structure		.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	F	Y	G	S	A	G	V	N	S	G	V	M	L	M	N	L	T	R	I	R	S	T	Q	F	K	N	S	M	I	P	T	G	L	A	W	E	D	M	L	Y	P	L	Y	Q	K	Y	K	N	A	I	T	W	G	D	Q	D	L	L	N	I	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	N
Query Conservation		.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	S	G	R	F	L	W	N	S	G	M	F	L	W	K	A	R	E	F	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	K	V	C	E	P	S	I	Y	E	N	L	K	D	V	D	P	R	N	F	E	E	L	K	K	A	Y	E	K	V	P	S	I	S	V	D	Y	A	V	M	E	K	S	K
Template Known Secondary structure					T																			.	.	.	.	.	.	.	.	.	.	.	.	.														T	T			S	S												S									T	T	T	T		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.														.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	C	L	Y	V	F	P	C	Q	W	N	Y	R	P	D	H	C	M	Y	G	S	N	C	R	E	A	E	H	E	G	V	S	V	L	H	G	N	R	G	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	R	V	V	K	A	D	F	E	W	S	D	L	G	N	W	S	S	V	R	E	I	E	G	Y	T	E	E	S	D	E	V	I	L	V	D	S	D	R	V	F
Template Known Secondary structure										S			B				S										S					S	S					S			S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions