Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJZ3
Confidence15.30%DateSat Jun 16 10:31:38 BST 2012
Rank34Aligned Residues25
% Identity32%Templatec2vwkA_
PDB info PDB header:dna replicationChain: A: PDB Molecule:dna polymerase; PDBTitle: uracil recognition in archaeal dna polymerases captured by2 x-ray crystallography. v93q polymerase variant
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   208.210.........220 .........230..
Predicted Secondary structure 



....

Query SS confidence 












. . . .











Query Sequence  SLLYVDTDVLFLR. . . . PVDDIWKLLRLF
Query Conservation 










  ....

 


  
  
Alig confidence 












....











Template Conservation   










                
Template Sequence  KVLYADTDGFFATIPGADAETVKKKAKEF
Template Known Secondary structure  TT
TT

Template Predicted Secondary structure 






Template SS confidence 




























   535....540.........550.........560...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions