 |
| Job Description | A0PJZ3 | | Confidence | 8.33% | Date | Sat Jun 16 10:31:38 BST 2012 |
| Rank | 67 | Aligned Residues | 21 |
| % Identity | 29% | Template | c2gv9B_ |
| PDB info |
PDB header:transferase | Chain: B: PDB Molecule:dna polymerase; |
PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase
|
| Resolution | 2.68 Å |
|
| | |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
. | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | |  |
|
|  | | |
|
| . | . | . | . |
| | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence | |
S | L | L | Y | V | D | T | D | V | L | F | L | R | . |
. |
. |
. |
P | V | D | D | I | W | K | L |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
| | | . | . | . | . |
|
| |
|
|
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | |
| | | | |
| Template Sequence | |
R | I | I | Y | G | D | T | D | S | I | F | V | L | C | R | G | L | T | A | A | G | L | T | A | M |
| Template Known Secondary structure | |
| | | | |
| S | S | | | | | | | | T | B |
| S | T | T | | | | |
| Template Predicted Secondary structure | |
| | | |
|
|
|
| | | | | |
|
|
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
881 | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
