Job Description A0PJZ3 Confidence 100.00% Date Sat Jun 16 10:31:38 BST 2012 Rank 1 Aligned Residues 254 % Identity 20% Template c1ga8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:galactosyl transferase lgtc; PDBTitle: crystal structure of galacosyltransferase lgtc in complex2 with donor and acceptor sugar analogs. Resolution 2.00 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		H	L	A	V	V	A	C	G	N	R	L	E	E	T	L	V	M	L	K	S	A	V	L	F	S	H	.	R	K	I	Q	F	H	I	F	T	E	D	S	L	K	P	E	F	D	K	Q	L	R	Q	W	P	D	S	Y	T	K	K	F	E	H	R	I	Y	P	I	T	F	S	V	G	N	P	Q	E	W	K	K	L	F
Query Conservation																												.
Alig confidence																												.																																														.	.
Template Conservation																																																																										.	.
Template Sequence		D	I	V	F	A	A	D	D	N	Y	A	A	Y	L	C	V	A	A	K	S	V	E	A	A	H	P	D	T	E	I	R	F	H	V	L	D	A	G	I	S	E	A	N	R	A	A	V	A	A	N	L	R	G	G	G	G	N	I	R	F	I	D	V	N	P	E	D	F	A	G	F	P	.	.	L	N	I	R	H	I
Template Known Secondary structure									G	G	G																T	T	S									S	S												T	S	G	G	G	T	T	T								G	G	G	G	T	T	S		.	.				T	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	C	A	A	Q	R	L	F	L	P	V	I	L	K	D	V	D	S	L	L	Y	V	D	T	D	V	L	F	L	R	P	V	D	D	I	W	K	L	L	R	L	F	N	S	T	Q	L	A	A	M	A	P	E	H	E	I	P	K	I	G	W	Y	S	R	F	A	R	H	P	F	Y	G	S	A	G	V	N	S	G
Query Conservation
Alig confidence																																									.	.										.																								.
Template Conservation																																									.	.										.																								.
Template Sequence		S	I	T	T	Y	A	R	L	K	L	G	E	Y	I	A	D	C	D	K	V	L	Y	L	D	I	D	V	L	V	R	D	S	L	T	P	L	W	D	T	.	.	D	L	G	D	N	W	L	G	A	.	S	I	D	L	F	V	E	R	Q	E	G	Y	K	Q	K	I	G	X	A	D	G	E	Y	.	Y	F	N	A	G
Template Known Secondary structure			G	G	G	G	G	G	G	G							S		S							S	S					S							T		.	.			T	T		S				.								T	S	T	T					T	T			T	T	S		.
Template Predicted Secondary structure																																									.	.										.																								.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.									340	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.
Query Sequence		V	M	L	M	N	L	T	R	I	R	S	T	Q	F	K	N	S	M	I	P	T	G	L	A	W	E	D	M	L	Y	P	L	Y	Q	K	Y	K	N	A	I	T	W	G	D	Q	D	L	L	N	I	I	F	Y	F	N	P	E	C	L	Y	V	F	P	C	Q	W	N	Y	R	P	.	.	.	.	.	.	.	.	D	H
Query Conservation																																																																								.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																															.	.	.													.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		V	L	L	I	N	L	K	K	W	R	R	H	D	I	.	.	.	.	.	.	.	.	.	.	.	F	K	X	S	S	E	W	V	E	Q	Y	K	D	V	X	Q	Y	Q	D	Q	D	I	L	N	G	L	F	K	G	G	.	.	.	V	C	Y	A	N	S	R	F	N	F	X	P	T	N	Y	A	F	X	A	S	R	H
Template Known Secondary structure											T	T	S			.	.	.	.	.	.	.	.	.	.	.												T	T	T		S	S	T										T	T	S	.	.	.						G	G	G	S	B							T				S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		C	M	Y	G	S	N	C	R	E	A	E	H	E	G	V	S	V	L	H	G	N	.	.	R	G	V	Y	H	D	D	K	Q	P	T	F	R	A	L	Y	E	A	I	R	D	F
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		T	D	P	L	Y	R	D	R	T	N	T	V	X	P	V	A	V	S	H	Y	C	G	P	A	K	P	W	H	R	D	C	T	A	W	G	A	E	R	F	T	E	L	A	G	S
Template Known Secondary structure											S			S	S		S						S	S			T	T	S	T	T			S	T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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