 |
| Job Description | A0PJZ3 | | Confidence | 13.41% | Date | Sat Jun 16 10:31:38 BST 2012 |
| Rank | 41 | Aligned Residues | 25 |
| % Identity | 28% | Template | c1d5aA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:protein (dna polymerase); |
PDBTitle: crystal structure of an archaebacterial dna polymerase2 d.tok. deposition of second native structure at 2.43 angstrom
|
| Resolution | 2.40 Å |
|
| | |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . |
| Predicted Secondary structure | |
 | | | | |  |
|
|  | | |
|
| . | . | . | . |
| | | | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
S | L | L | Y | V | D | T | D | V | L | F | L | R | . |
. |
. |
. |
P | V | D | D | I | W | K | L | L | R | L | F |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
| | | . | . | . | . |
|
| |
|
|
| | |
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | | | | | |
|
| Template Sequence | |
K | V | L | Y | A | D | T | D | G | F | F | A | T | I | P | G | A | D | A | E | T | V | K | N | K | A | K | E | F |
| Template Known Secondary structure | |
| | | | |
| S | S | | | | | |
| S | S |
|
| | | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | |
|
| | | | | |
|
|
|
|
| | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
535 | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
