Return to main results Retrieve Phyre Job Id

Job DescriptionP42685
Confidence100.00%DateTue Apr 3 14:35:51 BST 2012
Rank10Aligned Residues279
% Identity52%Templated1qcfa3
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250.........260.........270.........280.........290......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  FDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPNDFLREAQIMKNLRHPKLIQLYAVC
Query Conservation            


      
   

 
 

 
          



 

        
  
   
  
 




 
 

 
Alig confidence 















































































Template Conservation   
          
      
   

 
 

 

         



              
   
  
 
 


      
Template Sequence  KPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV
Template Known Secondary structure 






TT
SB

GGG

SSTTT
TTSB
TT


TTB

Template Predicted Secondary structure 




































Template SS confidence 















































































   249250.........260.........270.........280.........290.........300.........310.........320........
 
   297..300.........310.........320.........330.........340.........350.........360.........370......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  TLEDPIYIITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVGEHNIYKVADFGLA
Query Conservation         



    


   
       
       
  


 

 


   






  


       

 




Alig confidence  .














































































Template Conservation  .       
 
    
 
   
                       
  

     
      

        

 


 
Template Sequence  . TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA
Template Known Secondary structure  .
SSS



TT
BST

TT


SS
SGGG
TT


STTGG
Template Predicted Secondary structure  .











































Template SS confidence 















































































   330.........340.........350.........360.........370.........380.........390.........400........
 
   377..380.........390.........400.........410.........420.........430.........440.........450......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  RVFKVDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQPS
Query Conservation 
                     
 


 
     
 










 

 
 
  
       
    
  
 
   
 
Alig confidence 
















...



























































Template Conservation                   ...  
 


          






 




 
 
  

           
          
Template Sequence  RVIEDNEYTAREGAKFP. . . IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE
Template Known Secondary structure  GGB

TT
SSSS
...GGGS




TTS

SSTT

T





T
Template Predicted Secondary structure 














...






























Template SS confidence 















































































   409410.........420..... ....430.........440.........450.........460.........470.........480.....
 
   457..460.........470.........480.........490.........
Predicted Secondary structure 
















Query SS confidence 










































Query Sequence  NCPQQFYNIMLECWNAEPKERPTFETLRWKLEDYFETDSSYSD
Query Conservation    
  
  

  
   

  


   
   
            
Alig confidence 










































Template Conservation       
  

  

  

  


   
   
            
Template Sequence  NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQEE
Template Known Secondary structure  TS
T
SSGGGS

TSSSSS




Template Predicted Secondary structure 
















Template SS confidence 










































   486...490.........500.........510.........520........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions