Return to main results Retrieve Phyre Job Id

Job DescriptionP42685
Confidence100.00%DateTue Apr 3 14:35:51 BST 2012
Rank11Aligned Residues286
% Identity45%Templated1opja_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230.........240.........250... ......260.........270.........280.........290....
Predicted Secondary structure 





















.














Query SS confidence 





































.








































Query Sequence  PFDLSYKTVDQWEIDRNSIQLLKRLGSGQFGEVWEGLW. NNTTPVAVKTLKPGSMDPNDFLREAQIMKNLRHPKLIQLYA
Query Conservation             


      
   

 
 

 
     .     



 

        
  
   
  
 




 
 
Alig confidence 





































.








































Template Conservation     
  
      
          

 
  
 

 
        



         
    
      
 
 


    
Template Sequence  AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG
Template Known Secondary structure 


TTSTT

TTB

GGGTTTTTTSSGGGT

TT
S



TTB

Template Predicted Secondary structure 






























Template SS confidence 















































































   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   295....300.........310.........320.........330.........340.........350.........360.........370....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  VCTLEDPIYIITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVGEHNIYKVADFG
Query Conservation 
        



    


   
       
       
  


 

 


   






  


       

 


Alig confidence 















































































Template Conservation           

 
    
 
   
                   
       
     
  

  

        

 


Template Sequence  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG
Template Known Secondary structure 
SSSS


TT
BS
TTTS
TT


S

SGGG
GGG




Template Predicted Secondary structure 























































Template SS confidence 















































































   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   375....380.........390.........400.........410.........420.........430.........440.........450....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LARVFKVDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQ
Query Conservation 


                     
 


 
     
 










 

 
 
  
       
    
  
 
   
Alig confidence 


















...

























































Template Conservation   
                 ...  
 


           

 


 




 
 
  

                    
Template Sequence  LSRLMTGDTYTAHAGAKFP. . . IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER
Template Known Secondary structure 
TTT

SSSSTT
...GGG




STTS

SSTT

TT




Template Predicted Secondary structure 












...

































Template SS confidence 















































































   403......410.........420. ........430.........440.........450.........460.........470.........
 
   455....460.........470.........480.........490.........500....
Predicted Secondary structure 























Query SS confidence 

















































Query Sequence  PSNCPQQFYNIMLECWNAEPKERPTFETLRWKLEDYFETDSSYSDANNFI
Query Conservation 
   
  
  

  
   

  


   
   
                
Alig confidence 

















































Template Conservation         
  

   
   
  


  

   
  
              
Template Sequence  PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL
Template Known Secondary structure 
TT

T
SSGGGS

TTSSS

Template Predicted Secondary structure 
















Template SS confidence 

















































   480.........490.........500.........510.........520.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions