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Job DescriptionP42685
Confidence100.00%DateTue Apr 3 14:35:51 BST 2012
Rank20Aligned Residues251
% Identity25%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250..... ....260........ .270.........280.... .....290.........300
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Query Sequence  WEIDRNSIQLLKRLGSGQFGEVWEGLWNN. TTPVAVKTLKPGS. . . . MDPNDFLREAQIMKNL. RHPKLIQLYAVCTLED
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Template Sequence  PVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD
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TTSSBTTTB
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TTTTT
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   289290.........300.........310.........320.........330.........340.........350.........360........
 
   301........310.........320.........330.........340.........350.........360.........370.........380
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Query Sequence  PIYIITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVGEHNIYKVADFGLARVFK
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Template Sequence  RLYFVMEYVNGGDLMYHIQQV. . GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI
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S
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   415....420.........430..... ....440.........450.........460.........470.........480.........490..
 
   381........390.........400.........410.........420.........430.........440.........450.........460
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Query Sequence  VDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQPSNCPQ
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Template Sequence  WDGV. . . . . TTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEHN. VAYPKSMSK
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TT
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   493... ...500.........510.........520.........530..... ....540.........550...... ...560.....
 
   461........470......... 480......
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Query Sequence  QFYNIMLECWNAEPKERPT. . . . . FETLRWK
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Template Sequence  EAVAICKGLMTKHPGKRLGCGPEGERDIKEH
Template Known Secondary structure  S
SSSTT
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   567..570.........580.........590.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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