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Job DescriptionP42685
Confidence100.00%DateTue Apr 3 14:35:51 BST 2012
Rank132Aligned Residues234
% Identity21%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SGQFGEVWEGLW. NNTTPVAVKTLKPGSMDPNDFLREAQIMKNLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQN
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Template Sequence  KEELSVVRRCVHKTTGLEFAAKIINTD. . . FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA
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   16...20.........30.........40.. .......50.........60.........70.........80.........90..
 
   321........330.........340.........350.........360... ......370.........380.........390.......
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Query Sequence  DTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVG. . . EHNIYKVADFGLARVFKVDNEDIYESRHEIKLPV
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Template Sequence  R. . EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA. . . . . WHGFAGTP
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   104 .....110.........120.........130.........140.........150.........160........ .170......
 
   398.400.........410.........420.........430.........440.........450...... ...460.........470....
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Query Sequence  KWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQPS. . . NCPQQFYNIMLECWNAEP
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Template Sequence  GYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP
Template Known Secondary structure  TT

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   177..180.........190.........200....... ..210.........220.........230.........240.........250.....
 
   475....480......
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Query Sequence  KERPTFETLRWK
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Template Sequence  KKRITADQALKV
Template Known Secondary structure  GGS

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   256...260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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