Job Description P42685 Confidence 100.00% Date Tue Apr 3 14:35:51 BST 2012 Rank 69 Aligned Residues 240 % Identity 27% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		238	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure												.																																						.
Query SS confidence												.																																						.
Query Sequence		K	R	L	G	S	G	Q	F	G	E	.	V	W	E	G	L	W	N	N	T	T	P	V	A	V	K	T	L	K	P	G	S	M	D	P	N	D	F	L	R	E	A	Q	I	M	K	N	L	.	R	H	P	K	L	I	Q	L	Y	A	V	C	T	L	E	D	P	I	Y	I	I	T	E	L	M	R	H	G	S	L	Q
Query Conservation												.																																						.
Alig confidence												.									.												.	.																.																											.
Template Conservation																					.												.	.																																											.
Template Sequence		K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	Q	G	.	R	P	V	A	V	K	R	M	L	I	D	.	.	F	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C	S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	.	L	N	L	Q
Template Known Secondary structure								T	T	T								S	S	S	.										G	G	.	.	G															T	T	S	T	T	B										T	T										S	.
Template Predicted Secondary structure																					.												.	.																																											.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.		.	.	.	700	.	.	.	.	.	.	.			.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.		750	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.														.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	L	Q	N	D	T	G	S	K	I	H	L	T	Q	.	.	.	.	.	Q	V	D	M	A	A	Q	V	A	S	G	M	A	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	E	H	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	V	A	D	F	G	L	A	R
Query Conservation																	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C	K
Template Known Secondary structure					T			S		S	T	T						S	S																				T	T							S	T	T	T											S			S	S		S							B				S	S
Template Predicted Secondary structure
Template SS confidence
		754	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.				.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																																	.	.	.																																											.	.	.	.
Query SS confidence																																	.	.	.																																											.	.	.	.
Query Sequence		V	F	K	V	D	N	E	D	I	Y	E	S	R	H	E	I	K	L	P	V	K	W	T	A	P	E	A	I	R	S	N	.	.	.	K	F	S	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	I	T	Y	G	K	M	P	Y	S	G	M	T	G	A	Q	V	I	Q	M	L	A	Q	N	Y	.	.	.	.
Query Conservation																																	.	.	.																																											.	.	.	.
Alig confidence																		.	.	.													.	.	.																												.	.														.	.	.	.
Template Conservation																		.	.	.																																											.	.
Template Sequence		K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	.	.	.	S	G	W	R	A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	.	.	D	K	Y	S	R	E	S	N	I	I	R	G	I	F	S	L	D
Template Known Secondary structure				T	T	T									S	G	G	.	.	.	G	G	G							S	T	T	T						T																T	T	S			T	T		.	.	S											T
Template Predicted Secondary structure																		.	.	.																																											.	.
Template SS confidence
		834	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.				850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.			.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.
				451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	L	P	Q	P	S	N	C	P	Q	Q	F	Y	N	I	M	L	E	C	W	N	A	E	P	K	E	R	P	T	F	E	T	L	R	W	K
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		E	M	K	C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	L	R	H
Template Known Secondary structure				T	T																		T		S	S	T	T	T	S								T	S
Template Predicted Secondary structure
Template SS confidence
		940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions