Job Description P42685 Confidence 100.00% Date Tue Apr 3 14:35:51 BST 2012 Rank 265 Aligned Residues 260 % Identity 16% Template c3e3pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein kinase, putative glycogen synthase PDBTitle: glycogen synthase kinase from leishmania major Resolution 2.00 Å

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		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.								.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.
Query Sequence		N	S	I	Q	L	L	K	R	L	G	S	G	Q	F	G	E	V	W	E	G	L	W	N	N	T	T	P	V	A	V	K	T	L	K	P	G	S	M	D	P	N	D	F	L	R	E	A	Q	I	M	K	N	L	R	H	P	K	L	I	Q	L	Y	A	V	C	T	L	E	D	P	.	.	.	.	.	.	.	I	Y	I
Query Conservation																																																																								.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		D	R	F	Q	V	T	V	Q	L	G	K	E	K	S	.	.	.	.	.	.	.	.	.	T	G	M	S	V	A	I	K	K	V	I	Q	D	P	R	F	R	N	R	E	L	Q	I	M	Q	D	L	A	V	L	H	H	P	N	I	V	Q	L	Q	S	Y	F	Y	T	L	G	E	R	D	R	R	D	I	Y	L	N	V
Template Known Secondary structure		T	T											T	T	.	.	.	.	.	.	.	.	.	T													T	T																		T	T	B												S	S		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																	.																																												.	.	.
Query SS confidence																	.																																												.	.	.
Query Sequence		I	T	E	L	M	R	H	G	S	L	Q	E	Y	L	Q	.	N	D	T	G	S	K	I	H	L	T	Q	Q	V	D	M	A	A	Q	V	A	S	G	M	A	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	.	.	.	G	E	H	N	I	Y	K	V	A	D	F	G	L	A	R	V	F	K
Query Conservation																	.																																												.	.	.
Alig confidence																	.																																												.	.	.
Template Conservation
Template Sequence		V	M	E	Y	V	P	D	T	L	H	R	C	C	R	N	Y	Y	R	R	Q	V	A	P	P	P	I	L	I	K	V	F	L	F	Q	L	I	R	S	I	G	C	L	H	L	P	S	V	N	V	C	H	R	D	I	K	P	H	N	V	L	V	N	E	A	D	G	T	L	K	L	C	D	F	G	S	A	K	K	L	S
Template Known Secondary structure							S		B											T	T																							T	S	T	T	T			B		S				G	G	G					T	T	T	T							G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	N	E	D	I	Y	E	S	R	H	E	I	K	L	P	V	K	W	T	A	P	E	A	I	R	S	N	K	F	S	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	I	T	Y	G	K	M	P	Y	S	G	M	T	G	A	Q	V	I	Q	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																																.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																																.
Template Sequence		P	S	E	P	N	V	A	Y	I	C	S	R	Y	.	.	.	.	Y	R	A	P	E	L	I	F	G	N	Q	H	Y	T	T	A	V	D	I	W	S	V	G	C	I	F	A	E	M	M	L	.	G	E	P	I	F	R	G	D	N	S	A	G	Q	L	H	E	I	V	R	V	L	G	C	P	S	R	E	V	L	R	K
Template Known Secondary structure		T	T	S				S	T	T	S		G	G	.	.	.	.	G							T	T		S	S			T																	.	S	S		S	S			S	S														S
Template Predicted Secondary structure															.	.	.	.																																.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
																			447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	N	Y	R	L	P	Q	P	S	N	C	P	Q	Q	F	Y	N	I	M	L	E	C	W	N	A	E	P	K	E	R	P	T	F	E	T	L	R	W	K	.	.	L	E	D	Y	F	E	T	D	S	S	Y	S	D	A	N	N	F	I	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		L	N	P	S	H	T	D	V	D	L	Y	N	S	K	G	I	P	W	S	N	V	F	S	D	H	S	L	K	D	A	K	E	A	Y	D	L	L	S	A	L	L	Q	Y	L	P	E	E	R	M	K	P	Y	E	A	L	C	H	P	Y	F	D	E	L	H	D	P	A	T	K	L	P	N	N	K	D	L	P	E
Template Known Secondary structure				T	T				G	G	G												T		T	T			S	S												S		S	S	G	G	G	S							T	T	S	G	G	G	G	G	G	G		T	T		B		T	T	S		B			T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions