Job Description P42685 Confidence 100.00% Date Tue Apr 3 14:35:51 BST 2012 Rank 248 Aligned Residues 251 % Identity 17% Template c3begA_ PDB info PDB header:transferase/splicing Chain: A: PDB Molecule:serine/threonine-protein kinase srpk1; PDBTitle: crystal structure of sr protein kinase 1 complexed to its substrate2 asf/sf2 Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.									.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																																	.	.	.	.	.	.	.	.
Query SS confidence																													.																																	.	.	.	.	.	.	.	.
Query Sequence		E	I	D	R	N	S	I	Q	L	L	K	R	L	G	S	G	Q	F	G	E	V	W	E	G	L	W	N	.	N	T	T	P	V	A	V	K	T	L	K	P	G	S	M	D	P	N	D	F	L	R	E	A	Q	I	M	K	N	L	R	H	.	.	.	.	.	.	.	.	P	K	L	I	Q	L	Y	A	V	C	T	L
Query Conservation																													.																																	.	.	.	.	.	.	.	.
Alig confidence																													.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	F	N	G	R	Y	H	V	I	R	K	L	G	W	G	H	F	S	T	V	W	L	S	W	D	I	Q	G	K	K	F	V	A	M	K	V	V	K	S	A	E	H	Y	T	E	T	A	L	D	E	I	R	L	L	K	S	V	R	N	S	D	P	N	D	P	N	R	E	M	V	V	Q	L	L	D	D	F	K	I
Template Known Secondary structure					T	T	T											S	S									S	S	S	S	S									S																				S	S		T	T		T	T	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		299					300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	D	P	I	Y	I	I	T	E	L	M	R	H	G	S	L	Q	E	Y	L	Q	N	D	T	G	S	K	I	H	L	T	Q	Q	V	D	M	A	A	Q	V	A	S	G	M	A	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	E	H	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	V	N	G	T	H	I	C	M	V	F	E	V	L	G	H	H	L	L	K	W	I	I	K	S	N	Y	Q	G	L	P	L	P	C	V	K	K	I	I	Q	Q	V	L	Q	G	L	D	Y	L	H	T	K	C	R	I	I	H	T	D	I	K	P	E	N	I	L	L	S	V	N	E	Q	Y	I	R	R	L	A	A
Template Known Secondary structure		B		S	S		B												B								T	T	T	S																									S								S	G	G	G															T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
																				366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	Y	K	V	A	D	F	G	L	A	R	V	F	K	V	D	N	E	D	I	Y	E	S	R	H	E	I	K	L	P	V	K	W	T	A	P	E	A	I	R	S	N	K	F	S	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		E	A	A	G	N	F	L	V	N	P	L	E	P	K	N	A	E	K	L	K	V	K	I	A	D	L	G	N	A	C	W	V	H	K	H	F	T	E	D	.	.	.	.	.	.	.	I	Q	T	R	Q	Y	R	S	L	E	V	L	I	G	S	G	Y	N	T	P	A	D	I	W	S	T	A	C	M	A	F	E	L	A
Template Known Secondary structure		T						S			S	S		G	G	G	T	T	T									T	T				S	S			S		S		.	.	.	.	.	.	.		S		G	G	G								T					T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.																																																450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Y	G	K	M	P	Y	S	G	M	T	G	A	Q	V	I	Q	M	L	A	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	L	P	Q	P	S	N	C	P	Q
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		T	.	G	D	Y	L	F	E	P	H	S	G	E	E	Y	T	R	D	E	D	H	I	A	L	I	I	E	L	L	G	K	V	P	R	K	L	I	V	A	G	K	Y	S	K	E	F	F	T	K	K	G	D	L	K	H	I	T	K	L	K	P	W	G	L	F	E	V	L	V	E	K	Y	E	W	S	Q	E	E	A	A
Template Known Secondary structure			.	S	S		S							S	S	S																S							T	T		T	T					B		S	S	S	S	B	S	S			S													T	T				T	T
Template Predicted Secondary structure			.
Template SS confidence
		546		.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	Y	N	I	M	L	E	C	W	N	A	E	P	K	E	R	P	T	F	E	T	L	R	W	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	T	D	F	L	L	P	M	L	E	L	I	P	E	K	R	A	T	A	A	E	C	L	R	H
Template Known Secondary structure			T								T		S	S	T	T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions