Job Description P42685 Confidence 99.88% Date Tue Apr 3 14:35:51 BST 2012 Rank 335 Aligned Residues 151 % Identity 19% Template c2yleA_ PDB info PDB header:actin-binding protein Chain: A: PDB Molecule:protein spire homolog 1; PDBTitle: crystal structure of the human spir-1 kind fsi domain in2 complex with the fsi peptide Resolution 1.80 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		R	H	G	S	L	Q	E	Y	L	Q	N	D	T	G	S	K	I	H	L	T	Q	Q	V	D	M	A	A	Q	V	A	S	G	M	.	A	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	E	H	N	I	Y	K	V	A	D	F	G	L	A	R	V	F	K	V	D	N	E	D	I	Y	E
Query Conservation																																			.
Alig confidence														.																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	S	L	E	E	I	L	R	L	Y	.	N	Q	P	I	N	E	E	Q	A	W	A	V	C	Y	Q	C	C	G	S	L	R	A	A	A	R	R	R	Q	P	R	H	R	V	R	S	A	A	Q	I	R	V	W	R	D	G	A	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S												.	T	S																								T	T								S	G	G	G					T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.						.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		S	R	H	E	I	K	L	P	V	K	W	T	A	P	E	A	I	R	S	N	K	F	S	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	I	T	Y	G	K	M	P	Y	S	G	M	T	.	.	.	.	.	G	A	Q	V	I	Q	M	L	A	Q	N	Y	R	L	P	Q	P	S	N	C	P	Q	Q	F	Y
Query Conservation																																																				.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																													.										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	K	L	G	Y	S	Q	C	M	E	T	E	V	I	E	S	L	G	I	I	I	Y	K	A	L	D	.	Y	G	L	K	E	N	E	E	R	E	L	S	P	P	L	E	Q	L	I	D	H	M	A	N	T	V	E	E	K	R	K	I	S	A	I	R	S	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.						S	S	S	S	S																		T	.	T	T			T	T																	T	T						S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
														99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	M	L	E	C	W	N	A	E	P	K	E	R	P	T	F	E	T	L	R	W	K	L	E	D	Y	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	M	K	L	C	A	A	H	L	P	T	E	S	D	A	P	N	H	Y	Q	A	V	C	R	A	L	F	A
Template Known Secondary structure									T	T	S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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