Job Description P42685 Confidence 99.60% Date Tue Apr 3 14:35:51 BST 2012 Rank 394 Aligned Residues 77 % Identity 26% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		A	E	P	W	F	F	G	A	I	G	R	S	D	A	E	K	Q	L	L	Y	S	E	N	K	T	G	S	F	L	I	R	E	S	E	S	Q	K	G	E	F	S	L	S	V	L	D	G	A	V	V	.	K	H	Y	R	I	K	R	L	D	E	G	G	F	F	L	T	R	R	R	I	F	S	T	L	N	E	F	V	S
Query Conservation																																																				.
Alig confidence								.														.	.	.											.																	.						.	.
Template Conservation								.														.	.	.											.																							.	.
Template Sequence		K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	.	.	E	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S
Template Known Secondary structure		G	S	T	T			.														.	.	.	S	S									.	S	S	T	T										T	T								.	.				S	S					T	T				S	S
Template Predicted Secondary structure								.														.	.	.											.																							.	.
Template SS confidence
		791	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.				810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.			.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
		192	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	T	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	V	R	P
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		864	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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