247 c2vagA_ Probab=100.00  E-value=2.7e-39  Score=235.10  Aligned_columns=257  Identities=21%

Q ss_pred             CCCHHHEEEEECCCCCCCEEEEEEEEC--CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEEEC
Q ss_conf             217578565310030588279999977--99199999988420288999999999985499857------1199999868
Q batch____       228 EIDRNSIQLLKRLGSGQFGEVWEGLWN--NTTPVAVKTLKPGSMDPNDFLREAQIMKNLRHPKL------IQLYAVCTLE  299 (505)
Q Consensus       228 ei~~~~~~l~~~LG~G~fG~V~~~~~~--~~~~VAvK~lk~~~~~~~~f~~E~~~l~~l~HpnI------V~l~gv~~~~  299 (505)
                      ++-.+.+++.++||+|+||.||+|++.  +++.||||+++.+....+.+++|+.+|++++|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             95899998889885999998448888899999999999999999875112321231877702234654110000013330
Q batch____       300 DPIYIITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVGEHNIYKVADFGLARVF  379 (505)
Q Consensus       300 ~~~~iVmE~~~~GsL~~~L~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iiHrDLk~~Nil~~~~~~~ki~DFGlsr~~  379 (505)
                      ..++++++++.. +....................+..++..++.++|..+++|+|+++.|++++.++..++.||+.++..
T Consensus        89 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~  167 (330)
T c2vagA_          89 GHICIVFELLGL-STYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTL  167 (330)
T ss_dssp             TEEEEEEECCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEE
T ss_pred             CEECCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCC
T ss_conf             000012211236-7521112221110136565555544555554311012222345541589857886200034543344


Q ss_pred             CCCCCCEEE-------ECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC----
Q ss_conf             267863035-------214677775438977985389874689999999999999388899988798999999980----
Q batch____       380 KVDNEDIYE-------SRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQ----  448 (505)
Q Consensus       380 ~~~~~~~~~-------~~~~~~~~~~y~APE~l~~~~~s~ksDVwSfGiil~El~t~G~~P~~~~~~~e~~~~i~~----  448 (505)
                      .........       ..........+.+||......++.++|+|++|++++++.+ ++.|+...+..+....+..    
T Consensus       168 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~  246 (330)
T c2vagA_         168 INPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGP  246 (330)
T ss_dssp             SCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCS
T ss_pred             CCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             44321000146633267542001210232100000111123542102258731004-88988758968999999851388


Q ss_pred             ---------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
Q ss_conf             ---------------------------------------89999874589999999998637896786999999999
Q batch____       449 ---------------------------------------NYRLPQPSNCPQQFYNIMLECWNAEPKERPTFETLRWK  486 (505)
Q Consensus       449 ---------------------------------------g~r~~~p~~~p~~l~~li~~C~~~dP~~RPs~~~i~~~  486 (505)
                                                             ....+.+..+++++.+||.+||+.||++|||+++++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~H  323 (330)
T c2vagA_         247 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH  323 (330)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf             99889744201212354656653210001110012333100235654589999999998665881117767899679


