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Job DescriptionP42685
Confidence100.00%DateTue Apr 3 14:35:51 BST 2012
Rank105Aligned Residues244
% Identity23%Templatec2r5tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase sgk1; PDBTitle: crystal structure of inactive serum and glucocorticoid-2 regulated kinase 1 in complex with amp-pnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250... ......260.........270.........280.........290.........300......
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Query Sequence  EIDRNSIQLLKRLGSGQFGEVWEGLW. NNTTPVAVKTLKPGSMDPNDFLREAQIMKNLRHPKLIQLYAVCTLEDPIYIIT
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Template Sequence  HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKK. . . . . . . . AILVLLKNVKHPFLVGLHFSFQTADKLYFVL
Template Known Secondary structure  T

GGG

TT
TTT

GG........GB


B




TTB


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   92.......100.........110.........120.........130.. .......140.........150.........160...
 
   307..310.........320.........330.........340.........350.........360.........370.........380......
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Query Sequence  ELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDI
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Template Sequence  DYINGGELFYHLQRE. . RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN. . . . IEH
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S
B..SS

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B
GGG....B

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   177..180.........190. ........200.........210.........220.........230.........240....... ..250
 
   387..390.........400.........410.........420.........430.........440.........450.........460......
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Query Sequence  YESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQPSNCPQQFYNIM
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Template Sequence  NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY. GLPPFYSRNTAEMYDNILNK. PLQLKPNITNSARHLL
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SBS






TT



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TT

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   251........260.........270.........280.........290.. .......300.........310.. .......320........
 
   467..470.........480.......
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Query Sequence  LECWNAEPKERPTFETLRWKL
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Template Sequence  EGLLQKDRTKRLGAKDDFMEI
Template Known Secondary structure  T
SSGGGSTTTTTT
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   329330.........340.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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