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Job DescriptionP42685
Confidence100.00%DateTue Apr 3 14:35:51 BST 2012
Rank72Aligned Residues247
% Identity26%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250..... ....260.... .....270.........280.........290.........300........
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Query Sequence  RNSIQLLKRLGSGQFGEVWEGLWNN. TTPVAVKTL. KPGSMDPNDFLREAQIMKNLRHPKLIQLYAVCTLEDPIYIITEL
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Template Sequence  NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB


SS

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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   309310.........320.........330.........340.........350.........360.. .......370.........380.....
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Query Sequence  MRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLV. . . GEHNIYKVADFGLARVFKVDNED
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Template Sequence  CTGGELFERVVHK. . RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM.
Template Known Secondary structure 

SGGGGGTTT..SS

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SGGGSSSSTT




TT


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   105....110....... ..120.........130.........140.........150.........160.........170.........180.
 
   386...390.........400.........410.........420.........430.........440.........450..... ....460...
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Query Sequence  IYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQP. . SNCPQQFY
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Template Sequence  . . . . MRTKVGTPYYVSPQVLE. GLYGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAE
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S
GGGS
.T
B
TT.SS
S


S


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   182.......190........ .200.........210......... 220.........230.........240.........250.....
 
   464.....470.........480......
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Query Sequence  NIMLECWNAEPKERPTFETLRWK
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Template Sequence  SLIRRLLTKSPKQRITSLQALEH
Template Known Secondary structure  S
SSTTTS

TTS
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   257..260.........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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