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Job DescriptionP42685
Confidence100.00%DateTue Apr 3 14:35:51 BST 2012
Rank63Aligned Residues237
% Identity27%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QWEIDRNSIQLLKRLGSGQFGEVWEGLW. NNTTPVAVKTLK. . . . PGSMDPNDFLREAQIMKNLRHPKLIQLYAVCTLED
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
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G..GG
SSTTT

TT
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TTB


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   127..130 .........140.........150.........160.........170.........180.........190.........200....
 
   301........310.........320.........330.........340.........350.........360.........370.........380
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Query Sequence  PIYIITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVGEHNIYKVADFGLARVFK
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Template Sequence  RVYLILEYAPLGTVYRELQKL. . SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . .
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TT
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   381........390.........400.........410.........420.........430.........440.........450.........460
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Query Sequence  VDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEIITYGKMPYSGMTGAQVIQMLAQNYRLPQPSNCPQ
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Template Sequence  . . . . . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTE
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GGG

GGGTTTTSSGGG.SS
TT

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   279280.........290.........300.........310.. .......320.........330... ......340..
 
   461........470.........480......
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Query Sequence  QFYNIMLECWNAEPKERPTFETLRWK
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Template Sequence  GARDLISRLLKHNPSQRPMLREVLEH
Template Known Secondary structure  S
SSGGGS

T
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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