Job Description P42685 Confidence 100.00% Date Tue Apr 3 14:35:51 BST 2012 Rank 219 Aligned Residues 238 % Identity 21% Template c2ac5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g Resolution 3.20 Å

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		231	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure											.																	.										.																					.
Query SS confidence											.																	.										.																					.
Query Sequence		R	N	S	I	Q	L	L	K	R	.	L	G	S	G	Q	F	G	E	V	W	E	G	L	W	N	N	.	T	T	P	V	A	V	K	T	L	.	K	P	G	S	M	D	P	N	D	F	L	R	E	A	Q	I	M	K	N	L	.	R	H	P	K	L	I	Q	L	Y	A	V	C	T	L	E	D	P	I	Y	I	I	T
Query Conservation											.																	.										.																					.
Alig confidence											.																	.										.																					.
Template Conservation
Template Sequence		E	D	V	Y	Q	L	Q	E	D	V	L	G	E	G	A	H	A	R	V	Q	T	C	I	N	L	I	T	S	Q	E	Y	A	V	K	I	I	E	K	Q	P	G	H	I	R	S	R	V	F	R	E	V	E	M	L	Y	Q	C	Q	G	H	R	N	V	L	E	L	I	E	F	F	E	E	E	D	R	F	Y	L	V	F
Template Known Secondary structure		G	G	S							S					S	S									S	S	S													S	S																T				T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	M	R	H	G	S	L	Q	E	Y	L	Q	N	D	T	G	S	K	I	H	L	T	Q	Q	V	D	M	A	A	Q	V	A	S	G	M	A	Y	L	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	E	H	N	I	Y	K	V	A	D	F	G	L	A	R	V	F	K	V	D	N	E	D	I
Query Conservation
Alig confidence																	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	M	R	G	G	S	I	L	S	H	I	H	K	R	.	.	R	H	F	N	E	L	E	A	S	V	V	V	Q	D	V	A	S	A	L	D	F	L	H	N	K	G	I	A	H	R	D	L	K	P	E	N	I	L	C	E	H	P	N	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	V
Template Known Secondary structure					T	T		B									.	.	S																							T	T	T				S				G	G	G						T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																220	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.						410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.												.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																									.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	S	R	H	E	I	K	L	P	V	K	W	T	A	P	E	A	I	R	S	N	K	.	.	.	.	.	F	S	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	I	T	Y	G	K	M	P	Y	S	G	M	T	.	.	.	.	.	.	.	.	.	.	.	G	A	Q	V	I	Q	M	L	A	Q	N	Y
Query Conservation																									.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		K	I	C	D	F	G	P	C	G	S	A	E	Y	M	A	P	E	V	V	E	A	F	S	E	E	A	S	I	Y	D	K	R	C	D	L	W	S	L	G	V	I	L	Y	I	L	L	S	.	G	Y	P	P	F	V	G	R	C	G	S	D	C	G	W	A	C	P	A	C	Q	N	M	L	F	E	S	I	Q	E	G	K
Template Known Secondary structure			B							S	S	G	G	G								S	S	S					T	T	T	T																	.	S	S		S	S					S	S																			T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		451	.	.	.	.	.				.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		R	L	P	Q	P	S	.	.	.	N	C	P	Q	Q	F	Y	N	I	M	L	E	C	W	N	A	E	P	K	E	R	P	T	F	E	T	L	R	W	K
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		Y	E	F	P	D	K	D	W	A	H	I	S	C	A	A	K	D	L	I	S	K	L	L	V	R	D	A	K	Q	R	L	S	A	A	Q	V	L	Q	H
Template Known Secondary structure										T	T	S												S		S		T	T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions