Job Description P42685 Confidence 99.93% Date Tue Apr 3 14:35:51 BST 2012 Rank 304 Aligned Residues 138 % Identity 14% Template c1zp9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:rio1 kinase; PDBTitle: crystal structure of full-legnth a.fulgidus rio1 serine kinase bound2 to atp and mn2+ ions. Resolution 2.00 Å

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.															.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	K	R	L	G	S	G	Q	F	G	E	V	W	E	G	L	W	N	N	T	T	P	V	.	.	.	A	V	K	T	L	K	P	G	S	M	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	F	L	R	E	A	Q	I	M	K	N	L	R	H	P	K	L	I	Q	L	Y	A	V	C	T
Query Conservation																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	X	G	G	V	I	S	T	G	K	E	A	N	V	F	Y	A	D	G	V	F	D	G	K	P	V	A	X	A	V	K	I	Y	R	I	X	D	E	Y	L	Y	G	D	E	R	F	D	X	P	K	E	K	V	F	I	W	T	E	K	E	F	R	N	L	E	R	A	K	E	A	G	V	S	V	P	Q	P	Y	T	Y
Template Known Secondary structure											S	S											T	T														G	G	G	T	T	T		T	T	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		L	E	D	P	I	Y	I	I	T	E	L	M	R	H	G	S	L	Q	E	Y	L	Q	N	D	T	G	S	K	I	H	L	T	Q	Q	V	D	M	A	A	Q	V	A	S	G	M	A	Y	L	.	E	S	R	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	E	H	N	I	Y	K	V	A	D	F	G	L	A
Query Conservation																																																		.
Alig confidence					.	.																																												.																			.	.
Template Conservation					.	.																																																															.	.
Template Sequence		X	K	N	.	.	V	L	L	X	E	F	I	G	E	D	E	L	P	A	P	T	L	V	E	L	G	R	E	L	K	E	L	D	V	E	G	I	F	N	D	V	V	E	N	V	K	R	L	Y	Q	E	A	E	L	V	H	A	D	L	S	E	Y	N	I	X	Y	I	.	.	D	K	V	Y	F	I	D	X	G	Q	A
Template Known Secondary structure			T	T	.	.										T	T					B					G	G	G	G	G	G	S																			T	S					S	S		S	T	T	S				S	.	.	S	S							T	T
Template Predicted Secondary structure					.	.																																																															.	.
Template SS confidence
		141	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions