 |
| Job Description | P41271 | | Confidence | 90.73% | Date | Sat Jun 16 10:47:59 BST 2012 |
| Rank | 19 | Aligned Residues | 57 |
| % Identity | 16% | Template | d1ktza_ |
| SCOP info | Cystine-knot cytokines
| Cystine-knot cytokines
| Transforming growth factor (TGF)-beta
|
| Resolution | 2.15 |
|
 |
|   |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
. | . | . | . | . | . | . | . | 120 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | K | S | I | Q | N | R | A | C | L | G | Q | C | F | S | Y | S | V | P | N | T | F | P | Q | S | T | E | S | L | V | H | C | D | S | C | M | P | A | Q | S | M | W | E | I | V | T | L | E | C | P | G | H | E | E | V | P | R | V | D | K | L | V | . |
. |
E | K | I | L | H | C | S | C | Q |
| Query Conservation |   |
|   |   |
|   |
|   |   |
|   |
|   |
|   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |
|   |
| . | . |
|   |
|   |
|
|   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |
|   |   |
|   |
|   |
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |
|
|
|   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
| Template Sequence |   |
P | K | G | Y | Y | A | N | F | C | S | G | P | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Y | L | R | S | A | S | A | S | P | C | C | V | P | Q | D | L | E | P | L | T | I | L | Y | Y | . |
. |
. |
. |
V | G | R | T | P | K | V | E | Q | L | S | N | M | V | V | K | S | C | K | C | S |
| Template Known Secondary structure |   |
| S |  |  |  |
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
| S | S |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
|   |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|