Return to main results Retrieve Phyre Job Id

Job DescriptionP41271
Confidence86.36%DateSat Jun 16 10:47:59 BST 2012
Rank33Aligned Residues67
% Identity13%Templated1tgja_
SCOP infoCystine-knot cytokines Cystine-knot cytokines Transforming growth factor (TGF)-beta
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.. .......70.........80.........90.........100.........110. ........
Predicted Secondary structure  ........


















..
Query SS confidence 












. . . . . . . .
















































. .







Query Sequence  AKSIQNRACLGQC. . . . . . . . FSYSVPNTFPQSTESLVHCDSCMPAQSMWEIVTLECPGHEEVPRVDKLV. . EKILHCSC
Query Conservation 
  
 
  
 
 
........ 




   
   
   






 
     


 


   
  
 
 
..
 
 

 
Alig confidence 












........


































....









..







Template Conservation 
  
 
 

 
 
         

 
              


 
     
 


 ....            


  


Template Sequence  PKGYYANFCSGPCPYLRSADTTHSTVLGLYNTLNPEASASPCCVPQDLEPLTILYY. . . . VGRTPKVEQLSNMVVKSCKC
Template Known Secondary structure 
S

S


TTTTB
S
TTS





S....TT
B
Template Predicted Secondary structure 





























....






Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90. ........100.........110.
 
   120
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Q
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   112
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions