Emaill.a.kelley@imperial.ac.uk
DescriptionP41271
DateSat Jun 16 10:47:59 BST 2012
Unique Job IDe43169832b7ce691

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d1hcnb_



98.7 21 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Gonadodropin/Follitropin
2c1qfwB_



98.7 21 PDB header:immune system
Chain: B: PDB Molecule:gonadotrophin beta subunit;
PDBTitle: ternary complex of human chorionic gonadotropin with fv anti alpha2 subunit and fv anti beta subunit
3d1xwdb1



98.6 21 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Gonadodropin/Follitropin
4c2k8pA_



97.4 24 PDB header:signaling protein
Chain: A: PDB Molecule:sclerostin;
PDBTitle: characterisation of the structural features and2 interactions of sclerostin: molecular insight into a key3 regulator of wnt-mediated bone formation
5c2kd3A_



96.9 23 PDB header:protein binding
Chain: A: PDB Molecule:sclerostin;
PDBTitle: nmr structure of the wnt modulator protein sclerostin
6c3evsB_



95.1 18 PDB header:cytokine/transferase receptor
Chain: B: PDB Molecule:growth/differentiation factor 5;
PDBTitle: crystal structure of the gdf-5:bmp receptor ib complex.
7c2qcqA_



95.0 19 PDB header:signaling protein
Chain: A: PDB Molecule:bone morphogenetic protein 3;
PDBTitle: crystal structure of bone morphogenetic protein-3 (bmp-3)
8d2arpa1



94.8 16 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
9c2gyrB_



94.6 16 PDB header:hormone/growth factor
Chain: B: PDB Molecule:neurotrophic factor artemin, isoform 3;
PDBTitle: crystal structure of human artemin
10d2h62a1



94.6 18 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
11d1lxia_



94.6 17 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
12c1zkzA_



93.9 17 PDB header:hormone/growth factor
Chain: A: PDB Molecule:growth/differentiation factor 2;
PDBTitle: crystal structure of bmp9
13c3hh2B_



93.6 14 PDB header:signaling protein/cytokine
Chain: B: PDB Molecule:growth/differentiation factor 8;
PDBTitle: crystal structure of the myostatin:follistatin 288 complex
14c2qcwB_



93.6 18 PDB header:signaling protein
Chain: B: PDB Molecule:bone morphogenetic protein 6;
PDBTitle: crystal structure of bone morphogenetic protein-6 (bmp-6)
15d1pdga_



92.6 19 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Platelet-derived growth factor-like
16c1agqB_



92.1 19 PDB header:growth factor
Chain: B: PDB Molecule:glial cell-derived neurotrophic factor;
PDBTitle: glial cell-derived neurotrophic factor from rat
17c2xv7A_



92.1 19 PDB header:hormone
Chain: A: PDB Molecule:vascular endothelial growth factor d;
PDBTitle: crystal structure of vascular endothelial growth factor d
18c3mjkE_



91.4 23 PDB header:hormone
Chain: E: PDB Molecule:platelet-derived growth factor subunit a;
PDBTitle: structure of a growth factor precursor
19d1ktza_



90.7 16 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
20d1agqa_



90.5 19 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
21c3mjgB_



not modelled 90.3 21 PDB header:hormone/transferase
Chain: B: PDB Molecule:platelet-derived growth factor subunit b;
PDBTitle: the structure of a platelet derived growth factor receptor complex
22c2gnnD_



not modelled 89.5 21 PDB header:hormone/growth factor
Chain: D: PDB Molecule:vascular endothelial growth factor homolog;
PDBTitle: crystal structure of the orf virus nz2 variant of vegf-e
23c2c7wB_



not modelled 89.4 21 PDB header:growth factor
Chain: B: PDB Molecule:vascular endothelial growth factor b precursor;
PDBTitle: crystal structure of human vascular endothelial growth2 factor-b: identification of amino acids important for3 angiogeninc activity
24d2tgia_



not modelled 88.6 16 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
25d1fzva_



not modelled 88.6 18 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Platelet-derived growth factor-like
26c1fzvB_



not modelled 88.6 18 PDB header:hormone/growth factor
Chain: B: PDB Molecule:placenta growth factor;
PDBTitle: the crystal structure of human placenta growth factor-12 (plgf-1), an angiogenic protein at 2.0a resolution
27d1klaa_



not modelled 88.5 16 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
28c2vweB_



not modelled 88.2 21 PDB header:immune system
Chain: B: PDB Molecule:vascular endothelial growth factor b;
PDBTitle: crystal structure of vascular endothelial growth factor-b2 in complex with a neutralizing antibody fab fragment
29c2gnnA_



not modelled 88.0 21 PDB header:hormone/growth factor
Chain: A: PDB Molecule:vascular endothelial growth factor homolog;
PDBTitle: crystal structure of the orf virus nz2 variant of vegf-e
30c3v6bA_



not modelled 87.2 22 PDB header:hormone/signaling protein
Chain: A: PDB Molecule:vegf-e;
PDBTitle: vegfr-2/vegf-e complex structure
31d1wq9a_



not modelled 87.2 14 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Platelet-derived growth factor-like
32c3rjrD_



not modelled 87.2 16 PDB header:cytokine
Chain: D: PDB Molecule:transforming growth factor beta-1;
PDBTitle: crystal structure of pro-tgf beta 1
33d1tgja_



not modelled 86.4 13 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Transforming growth factor (TGF)-beta
34c2gnnB_



not modelled 82.4 23 PDB header:hormone/growth factor
Chain: B: PDB Molecule:vascular endothelial growth factor homolog;
PDBTitle: crystal structure of the orf virus nz2 variant of vegf-e
35c3v2aA_



not modelled 81.7 18 PDB header:hormone/signaling protein
Chain: A: PDB Molecule:vascular endothelial growth factor a;
PDBTitle: vegfr-2/vegf-a complex structure
36d1fltv_



not modelled 81.7 18 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Platelet-derived growth factor-like
37c2gnnC_



not modelled 80.1 21 PDB header:hormone/growth factor
Chain: C: PDB Molecule:vascular endothelial growth factor homolog;
PDBTitle: crystal structure of the orf virus nz2 variant of vegf-e
38d1wq8a_



not modelled 69.3 16 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Platelet-derived growth factor-like
39d2fiya1



not modelled 64.2 22 Fold:FdhE-like
Superfamily:FdhE-like
Family:FdhE-like
40c2x1wC_



not modelled 54.5 23 PDB header:hormone/signaling protein
Chain: C: PDB Molecule:vascular endothelial growth factor c;
PDBTitle: crystal structure of vegf-c in complex with domains 2 and 32 of vegfr2
41d1n26a1



not modelled 27.8 64 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
42c2nswA_



not modelled 17.3 60 PDB header:signaling protein
Chain: A: PDB Molecule:mating pheromone en-2;
PDBTitle: nmr solution structure of the pheromone en-2
43d1hcna_



not modelled 16.5 25 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Gonadodropin/Follitropin
44d1nuia2



not modelled 13.3 28 Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:DNA primase zinc finger
45c1tx6J_



not modelled 12.0 18 PDB header:hydrolase/protein binding
Chain: J: PDB Molecule:bowman-birk type trypsin inhibitor;
PDBTitle: trypsin:bbi complex
46d1mr1c_



not modelled 11.8 25 Fold:SAND domain-like
Superfamily:SAND domain-like
Family:SMAD4-binding domain of oncoprotein Ski
47c3facE_



not modelled 11.7 15 PDB header:unknown function
Chain: E: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of rhodobacter sphaeroides protein2 rsp_2168. northeast structural genomics target rhr83.
48c1tdhA_



not modelled 11.0 36 PDB header:hydrolase
Chain: A: PDB Molecule:nei endonuclease viii-like 1;
PDBTitle: crystal structure of human endonuclease viii-like 1 (neil1)
49d1k81a_



not modelled 10.8 21 Fold:Zinc-binding domain of translation initiation factor 2 beta
Superfamily:Zinc-binding domain of translation initiation factor 2 beta
Family:Zinc-binding domain of translation initiation factor 2 beta
50d1m4ua_



not modelled 9.2 29 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Noggin
51c1neeA_



not modelled 9.1 21 PDB header:translation
Chain: A: PDB Molecule:probable translation initiation factor 2 beta
PDBTitle: structure of archaeal translation factor aif2beta from2 methanobacterium thermoautrophicum
52c2e9hA_



not modelled 7.9 22 PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: solution structure of the eif-5_eif-2b domain from human2 eukaryotic translation initiation factor 5
53c2dcuB_



not modelled 7.9 28 PDB header:translation
Chain: B: PDB Molecule:translation initiation factor 2 beta subunit;
PDBTitle: crystal structure of translation initiation factor aif2betagamma2 heterodimer with gdp
54d2cora1



not modelled 7.2 45 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
55c3h32A_



not modelled 7.0 29 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of d-dimer from human fibrin complexed with gly-his-2 arg-pro-tyr-amide
56d1p8ba_



not modelled 6.9 36 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Albumin 1
57c3cw2M_



not modelled 6.8 24 PDB header:translation
Chain: M: PDB Molecule:translation initiation factor 2 subunit beta;
PDBTitle: crystal structure of the intact archaeal translation2 initiation factor 2 from sulfolobus solfataricus .
58d2cona1



not modelled 6.8 35 Fold:Rubredoxin-like
Superfamily:NOB1 zinc finger-like
Family:NOB1 zinc finger-like
59c2h43A_



not modelled 6.4 29 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of human fragment d complexed with ala-his-arg-pro-2 amide
60d1gsma1



not modelled 6.3 31 Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
61d2fufa1



not modelled 5.9 17 Fold:Origin of replication-binding domain, RBD-like
Superfamily:Origin of replication-binding domain, RBD-like
Family:The origin DNA-binding domain of SV40 T-antigen
62c1n73A_



not modelled 5.7 43 PDB header:blood clotting
Chain: A: PDB Molecule:fibrin alpha-1 chain;
PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide
63d1weqa_



not modelled 5.5 40 Fold:FYVE/PHD zinc finger
Superfamily:FYVE/PHD zinc finger
Family:PHD domain
64d1tdha3



not modelled 5.5 36 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
65d1gpua2



not modelled 5.4 63 Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:TK-like Pyr module
66c1re3A_



not modelled 5.4 29 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha/alpha-e chain;
PDBTitle: crystal structure of fragment d of bbetad398a fibrinogen with the2 peptide ligand gly-his-arg-pro-amide
67d1ju8a_



not modelled 5.3 45 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:omega toxin-like
Family:Albumin 1
68c2o01I_



not modelled 5.3 40 PDB header:photosynthesis
Chain: I: PDB Molecule:photosystem i reaction center subunit viii;
PDBTitle: the structure of a plant photosystem i supercomplex at 3.42 angstrom resolution
69c2wseI_



not modelled 5.3 40 PDB header:photosynthesis
Chain: I: PDB Molecule:photosystem i reaction center subunit viii;
PDBTitle: improved model of plant photosystem i
70c3lw5I_



not modelled 5.3 40 PDB header:photosynthesis
Chain: I: PDB Molecule:photosystem i reaction center subunit viii;
PDBTitle: improved model of plant photosystem i