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| Job Description | P41271 | | Confidence | 90.34% | Date | Sat Jun 16 10:47:59 BST 2012 |
| Rank | 21 | Aligned Residues | 81 |
| % Identity | 21% | Template | c3mjgB_ |
| PDB info |
PDB header:hormone/transferase | Chain: B: PDB Molecule:platelet-derived growth factor subunit b; |
PDBTitle: the structure of a platelet derived growth factor receptor complex
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| Resolution | 2.30 Å |
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| Query Sequence |   |
N | K | L | A | L | F | P | D | K | S | A | W | C | E | A | K | N | I | T | Q | I | V | . |
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G | H | S | G | C | E | A | K | S | I | Q | N | R | A | C | L | G | Q | C | F | S | Y | S | V | P | N | T | F | P | Q | S | T | E | S | L | V | H | C | D | S | C | M | P | A | Q |
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| Template Sequence |   |
S | L | T | I | A | E | P | A | M | I | A | E | C | K | T | R | T | E | V | F | E | I | S | R | R | L | I | D | R | T | N | A | N | F | L | V | W | P | P | C | . |
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4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
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| Predicted Secondary structure |   |
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| Query Sequence |   |
S | M | W | E | I | V | T | L | E | . |
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C | P | G | H | E | E | V | P | R | V | D | K | L | V | E | K | I | L | H | C | S | C | Q | A |
| Query Conservation |   |
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| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
V | Q | L | R | P | V | Q | V | R | K | I | E | I | V | R | K | K | P | I | F | K | K | A | T | V | T | L | E | D | H | L | A | C | K | C | E | T |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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