Return to main results Retrieve Phyre Job Id

Job DescriptionP41271
Confidence90.73%DateSat Jun 16 10:47:59 BST 2012
Rank19Aligned Residues57
% Identity16%Templated1ktza_
SCOP infoCystine-knot cytokines Cystine-knot cytokines Transforming growth factor (TGF)-beta
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110. ........120
Predicted Secondary structure 


















..
Query SS confidence 





























































. .








Query Sequence  AKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPAQSMWEIVTLECPGHEEVPRVDKLV. . EKILHCSCQ
Query Conservation 
  
 
  
 
 
 




   
   
   






 
     


 


   
  
 
 
..
 
 

 
 
Alig confidence 












..........
























....









..








Template Conservation 
  
 
  
 
 
..........         


 
     
 


 ....            


  



Template Sequence  PKGYYANFCSGPC. . . . . . . . . . PYLRSASASPCCVPQDLEPLTILYY. . . . VGRTPKVEQLSNMVVKSCKCS
Template Known Secondary structure 
S




..........
SS









....TT


Template Predicted Secondary structure 



..........


















....






Template SS confidence 








































































   36...40........ .50.........60.........70... ......80.........90....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions