 |
| Job Description | O95081 | | Confidence | 23.14% | Date | Wed May 9 18:00:30 BST 2012 |
| Rank | 155 | Aligned Residues | 117 |
| % Identity | 15% | Template | d1vqza2 |
| SCOP info | Class II aaRS and biotin synthetases
| Class II aaRS and biotin synthetases
| LplA-like
|
| Resolution | 1.99 |
|
 |
|   |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | A | A | S | E | V | W | C | R | R | V | R | E | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | C | S | Q | A | G | N | R | H | C | F | E | C | A | Q | R | G | V | T | Y | V | D | I | T | V | G | S | F | V | C | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | C | S | G | L | L | R | G | L | N | P | P |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |   |
|   |
|
|   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|   |
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|   |
|
|   |   |   | . |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
| Template Sequence |   |
K | S | F | S | T | P | V | I | N | T | L | A | Q | L | G | V | K | A | E | F | T | G | R | N | D | L | E | I | D | G | K | K | F | C | G | N | A | Q | A | Y | I | . |
N | G | R | I | X | H | H | G | C | L | L | F | D | V | D | L | S | V | L | A | N | A | L | K | V | S | K | D | K | F | E | S | K | G | V | K | S | V |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | T | T | T |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  | S | S |
|
| T | T |  |  |  |  |  | B |
|
|
| S | S |
|
|
|
|
| S |
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
|   |
|   |   |
|
81 | . | . | . | . | . | . | . | . | |
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
. |
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
. |
H | R | V | K | S | I | S | M | T | . |
. |
. |
T | F | T | E | P | E | V | V | F | L | Q | S | R | G | N | E | V | C | R | K | I | W | L | G | L | F | D | A | R | T | S | L | V | P | D | S | R | D | P | Q | K | V | K | E | F | L | Q | E | K | Y | E | K | K | R | W | Y | V | P |
| Query Conservation |   |
. |   |
|
|
|
|
|
|
|
| . | . | . |   |   |
|   |
|
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |
| Alig confidence |   |
. |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |
|
|
| Template Sequence |   |
R | A | R | V | T | N | I | I | N | E | L | P | K | K | I | T | V | E | K | F | R | D | L | . |
. |
. |
. |
. |
. |
. |
L | L | E | Y | X | K | K | E | Y | P | E | X | T | E | Y | V | F | S | E | E | E | L | A | E | I | N | R | I | K | D | T | K | F | G | T | W | D | W | N | Y | G |
| Template Known Secondary structure |   |
|
|
| B |
|
| G | G | G | T |
| S | S |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
| T | T |
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  | T |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|