Job Description O95081 Confidence 20.68% Date Wed May 9 18:00:30 BST 2012 Rank 177 Aligned Residues 98 % Identity 18% Template c2v9kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein flj32312; PDBTitle: crystal structure of human pus10, a novel pseudouridine2 synthase. Resolution 2.0 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	E	A	E	A	A	S	E	V	W	C	R	R	V	R	E	L	G	G	C	S	Q	A	G	N	R	H	C	F	E	C	A	Q	R	G	V	T	Y	V	D	I	T	V	G	S	F	V	C	T	T	C	S	G	L	L	R	G	L	N	P	P	H	R	V	K	S	I	S	M	T	T	F	T	E	P	E	V	V	F	.
Query Conservation																																																																																	.
Alig confidence						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.						.	.							.	.	.	.																	.
Template Conservation						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.						.	.							.	.	.	.
Template Sequence		L	T	E	E	.	.	N	K	H	V	A	Q	L	L	L	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	.	.	T	C	P	R	C	.	.	I	F	R	F	C	G	.	.	.	.	V	D	F	H	A	P	Y	K	L	P	Y	K	E	L	L	N	E
Template Known Secondary structure				G	G	.	.	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	.	.						.	.					T	T	.	.	.	.				S	G	G	G	G	S
Template Predicted Secondary structure						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.						.	.							.	.	.	.
Template SS confidence
		4	.	.	.			.	.	10	.	.	.	.	.	.	.	.																											.			20	.	.	.	.			.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
																							99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	S	R	G	N	E	V	C	R	K	I	W	L	G	L	F	D	A	R	.	.	.	.	.	.	T	S	L	V	P	D	S	R	D	P	Q	K	V	K	E	F	L	Q	E	K	Y	E	K	K	R	W	Y	V	P	P	D	Q	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	K	F	L	E	T	N	V	C	N	V	C	L	G	I	L	Q	E	F	C	E	K	D	F	I	K	K	V	C	Q	K	V	E	A	S	G	F	E	F	T	S	L	V	F	S	V	S	F	P	P	Q	L	S	V	R	E	H	A	A	W	L	L	V	K	Q	E	M	G	K	Q	S	L	S	L	G	R	D	D	I
Template Known Secondary structure							T					T	T	T	T	T	T	T	T	G	G	G	S														T					S		B								T	T																			T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		152	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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