Job Description O95081 Confidence 100.00% Date Wed May 9 18:00:30 BST 2012 Rank 3 Aligned Residues 122 % Identity 22% Template c2iqjB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:stromal membrane-associated protein 1-like; PDBTitle: crystal structure of the gap domain of smap1l (loc64744)2 stromal membrane-associated protein 1-like Resolution 1.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		A	A	S	E	V	W	C	R	R	V	R	E	L	G	G	C	S	Q	A	G	N	R	H	C	F	E	C	A	Q	R	G	V	T	Y	V	D	I	T	V	G	S	F	V	C	T	T	C	S	G	L	L	R	G	L	N	P	P	.	H	R	V	K	S	I	S	M	T	T	F	T	E	P	E	V	V	F	L	Q	S	R
Query Conservation																																																											.
Alig confidence															.	.	.	.	.																																								.
Template Conservation															.	.	.	.	.
Template Sequence		D	R	Y	Q	A	V	L	A	N	L	L	L	E	.	.	.	.	.	E	D	N	K	F	C	A	D	C	Q	S	K	G	P	R	W	A	S	W	N	I	G	V	F	I	C	I	R	C	A	G	I	H	R	N	L	G	V	H	I	S	R	V	K	S	V	N	L	D	Q	W	T	Q	E	Q	I	Q	C	M	Q	E	M
Template Known Secondary structure				S								T	T	S	.	.	.	.	.	G	G	G	G	B		T	T	T			B	S						T	T	T	T													T	T		T	T	T						T	T	T	S												T	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	E	V	C	R	K	I	W	L	G	L	F	D	A	R	T	S	L	V	P	D	S	R	D	P	Q	K	V	K	E	F	L	Q	E	K	Y	E	K	K	R	W	Y	V	P	P	D	Q	V	K	G
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		G	N	G	K	A	N	R	L	Y	E	A	Y	L	P	E	T	F	R	R	P	.	.	.	Q	I	D	P	A	V	E	G	F	I	R	D	K	Y	E	K	K	K	Y	M	D	R	S	L	D	I	N	A
Template Known Secondary structure											T	T	T			T	T					.	.	.		S													T	S		T	T			G	G	G		T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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