Job Description O95081 Confidence 28.61% Date Wed May 9 18:00:30 BST 2012 Rank 114 Aligned Residues 90 % Identity 16% Template c2gamA_ PDB info PDB header:transferase Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase; PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac Resolution 2.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		E	V	W	C	R	R	V	R	E	L	G	G	C	S	Q	A	G	N	R	H	C	F	E	C	A	Q	R	.	.	.	.	.	.	G	V	T	Y	V	D	I	T	V	G	S	F	V	C	T	T	.	.	.	.	.	.	C	S	G	L	L	R	G	L	N	P	P	H	R	V	K	S	I	S	M	T	T	F	T	E	P
Query Conservation																													.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence												.	.	.															.	.	.	.	.	.																	.	.	.	.	.	.								.		.	.				.	.	.	.	.	.	.
Template Conservation												.	.	.																																																		.		.	.				.	.	.	.	.	.	.
Template Sequence		E	F	L	W	A	T	I	Q	R	I	.	.	.	P	E	V	P	G	S	F	P	S	S	N	K	Y	D	L	S	D	M	N	A	I	A	R	F	V	K	W	Q	Y	F	E	G	D	V	S	N	G	A	P	Y	P	P	C	S	G	V	H	V	R	.	S	.	.	V	C	V	.	.	.	.	.	.	.	F	G	A	G
Template Known Secondary structure		G	T						T	T	S	.	.	.	T	T	S	T	T				S	S	G	G	G		B		T	T	T	S	S	S					B	T	T	T		S		G	G	G	T		S	S				S	S				T	.	T	.	.				.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.																																																		.		.	.				.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.			380	.	.								.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	F	L	Q	S	R	G	N	E	V	C	R	K	I	W	L	G	L	F	D	A	R	T	S	L	V	P	D	S	R	D	P	Q	K	V	K	E	F	L	Q	E	K
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		D	L	S	W	M	L	R	Q	H	H	L	F	A	N	K	F	D	M	D	.	.	.	.	.	.	.	.	.	V	D	P	F	A	I	Q	C	L	D	E	H	L	R	R	K
Template Known Secondary structure							T	T	S			S							T	T	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.										.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions