Job Description O95081 Confidence 100.00% Date Wed May 9 18:00:30 BST 2012 Rank 1 Aligned Residues 129 % Identity 68% Template c2d9lA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:nucleoporin-like protein rip; PDBTitle: solution structure of the arfgap domain of human rip Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	E	V	W	C	R	R	V	R	E	L	G	G	C	S	Q	A	G	N	R	H	C	F	E	C	A	Q	R	G	V	T	Y	V	D	I	T	V	G	S	F	V	C	T	T	C	S	G	L	L	R	G	L	N	P	P	H	R	V	K	S	I	S	M	T	T	F	T	E	P	E	V	V	F	L	Q	S	R	G
Query Conservation
Alig confidence															.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		S	S	G	L	K	M	L	R	D	M	T	G	L	.	.	.	.	.	P	H	N	R	K	C	F	D	C	D	Q	R	G	P	T	Y	V	N	M	T	V	G	S	F	V	C	T	S	C	S	G	S	L	R	G	L	N	P	P	H	R	V	K	S	I	S	M	T	T	F	T	Q	Q	E	I	E	F	L	Q	K	H	G
Template Known Secondary structure			T	T								T	T	S	.	.	.	.	.	T	T	T	S	B		S	S	S			B	S						T	T	T															S	S	S							S	S	S	S												T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	V	C	R	K	I	W	L	G	L	F	D	A	R	T	S	L	V	P	D	S	R	D	P	Q	K	V	K	E	F	L	Q	E	K	Y	E	K	K	R	W	Y	V	P	P	D	Q	V	K	G	P	T	Y	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	V	C	K	Q	I	W	L	G	L	F	D	D	R	S	S	A	I	P	D	F	R	D	P	Q	K	V	K	E	F	L	Q	E	K	Y	E	K	K	R	W	Y	V	P	P	E	Q	A	K	S	G	P	S	S
Template Known Secondary structure										S	S	S			T	T	T						S	S														T	S		T	T								S			S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions