Job Description O95081 Confidence 46.41% Date Wed May 9 18:00:30 BST 2012 Rank 64 Aligned Residues 36 % Identity 28% Template c1x79C_ PDB info PDB header:protein transport Chain: C: PDB Molecule:rab gtpase binding effector protein 1; PDBTitle: crystal structure of human gga1 gat domain complexed with2 the gat-binding domain of rabaptin5 Resolution 2.41 Å

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		92	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		T	E	P	E	V	V	F	L	Q	.	.	.	S	R	G	N	E	V	C	R	K	I	W	L	G	L	F	D	A	R	T	S	L	V	P	D	S	R	D	P	Q	K	V	K	E	F	L	Q	E	K	Y	E	K
Query Conservation											.	.	.
Alig confidence											.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	D	Q	V	K	K	L	Q	L	M	L	R	Q	A	N	D	Q	L	E	K	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	K	Q	E	L	E	D	F	I	K	Q	S	S	E	D
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.															.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions