Job Description O95081 Confidence 23.61% Date Wed May 9 18:00:30 BST 2012 Rank 150 Aligned Residues 81 % Identity 20% Template c1uf2A_ PDB info PDB header:virus Chain: A: PDB Molecule:core protein p3; PDBTitle: the atomic structure of rice dwarf virus (rdv) Resolution 3.50 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	E	A	A	S	E	V	W	C	R	R	V	R	E	L	G	G	C	S	Q	A	G	N	R	H	C	F	E	C	A	Q	R	G	V	T	Y	V	D	I	T	V	G	S	F	V	C	T	T	C	S	G	L	L	R	G	L	N	P	P	H	R	V	K	S	I	S	M	T	T	F	T	E	P	E	V	V	F	L
Query Conservation
Alig confidence																			.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	E	P	S	L	T	M	H	R	V	R	V	I	Y	S	M	.	.	.	.	.	.	L	N	D	Y	C	A	K	M	I	S	E	V	P	Y	E	S	S	F	V	G	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	K	S	V	T	L	N	K	L	G	D	R	N	M	D	A	L
Template Known Secondary structure		T	T																.	.	.	.	.	.				T	T	T														T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G	S	G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	R	G	N	E	V	C	R	K	I	W	L	G	L	F	D	A	R	T	S	L	V	P	D	S	R	D	P	Q	K	V	K	E	F	L	Q	E	K	Y	E	K	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	H	L	L	F	E	H	D	V	V	N	A	Q	R	E	N	R	I	F	Y	Q	R	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S	S															S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions