Phyre 2 alignment of O95081 with d2dipa1

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Job Description | O95081
Confidence | 47.34% | Date | Wed May 9 18:00:30 BST 2012
Rank | 61 | Aligned Residues | 45
% Identity | 18% | Template | d2dipa1
SCOP info | RING/U-box | RING/U-box | ZZ domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 44 | . | . | . | . | . | 50 | . | . | . |  |  |  | . | . | . | . | . | . | 60 | . | . | . | . | . |  | . | . | . | . | 70 |  |  | . | . | . | . | . | . | . | . | . | 80 |  | . | . | . | . | . | . | . | . | . | 90 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | R | H | C | F | E | C | A | Q | R | . | . | . | G | V | T | Y | V | D | I | T | V | G | S | F | . | V | C | T | T | C | . | . | S | G | L | L | R | G | L | N | P | P | . | H | R | V | K | S | I | S | M | T | T | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  | . | . | . |  | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | I | P | C | N | N | C | K | Q | F | P | I | E | G | K | C | Y | K | C | T | E | C | I | E | Y | H | L | C | Q | E | C | F | D | S | Y | C | H | L | S | . | . | . | H | T | F | T | F | R | E | K | R | N | Q | K | W
Template Known Secondary structure |  |  |  |  |  | S | S | S |  |  | S | S |  |  | S |  |  |  |  |  | S | S | S | S | S |  |  |  |  |  |  |  |  |  | T | T | S | G | G | G | . | . | . | S |  |  |  |  |  |  | S | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |  |  |  | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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