Phyre 2 alignment of O95081 with c1l4aE_

Return to main results | Retrieve Phyre Job Id

Job Description | O95081
Confidence | 30.77% | Date | Wed May 9 18:00:30 BST 2012
Rank | 102 | Aligned Residues | 15
% Identity | 20% | Template | c1l4aE_
PDB info | PDB header:endocytosis/exocytosis | Chain: E: PDB Molecule:synaphin a; | PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei
Resolution | 2.95 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | Q | K | V | K | E | F | L | Q | E | K | Y | E | K | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | E | E | M | R | Q | T | I | R | D | K | Y | G | L | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions