Phyre 2 Results for O95081

Phyre Home | Retrieve Phyre Job Id

Email | l.a.kelley@imperial.ac.uk
Description | O95081
Date | Wed May 9 18:00:30 BST 2012
Unique Job ID | dd03a86d26de46f9

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c2d9lA_
Top template information
PDB header:gene regulation Chain: A: PDB Molecule:nucleoporin-like protein rip; PDBTitle: solution structure of the arfgap domain of human rip
Confidence and coverage
Confidence: | 100.0% | Coverage: | 27%
129 residues ( 27% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 76% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | V | M | A | A | K | K | G | P | G | P | G | G | G | V | S | G | G | K | A | E | A | E | A | A | S | E | V | W | C | R | R | V | R | E | L | G | G | C | S | Q | A | G | N | R | H | C | F | E | C | A | Q | R | G | V | T | Y | V | D | I
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | T | V | G | S | F | V | C | T | T | C | S | G | L | L | R | G | L | N | P | P | H | R | V | K | S | I | S | M | T | T | F | T | E | P | E | V | V | F | L | Q | S | R | G | N | E | V | C | R | K | I | W | L | G | L | F | D | A | R | T | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | L | V | P | D | S | R | D | P | Q | K | V | K | E | F | L | Q | E | K | Y | E | K | K | R | W | Y | V | P | P | D | Q | V | K | G | P | T | Y | T | K | G | S | A | S | T | P | V | Q | G | S | I | P | E | G | K | P | L | R | T | L | L | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | D | P | A | P | S | L | S | V | A | A | S | T | S | S | Q | P | V | S | Q | S | H | A | R | T | S | Q | A | R | S | T | Q | P | P | P | H | S | S | V | K | K | A | S | T | D | L | L | A | D | I | G | G | D | P | F | A | A | P | Q | M | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | P | A | F | A | A | F | P | A | F | G | G | Q | T | P | S | Q | G | G | F | A | N | F | D | A | F | S | S | G | P | S | S | S | V | F | G | S | L | P | P | A | G | Q | A | S | F | Q | A | Q | P | T | P | A | G | S | S | Q | G | T | P | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | G | A | T | P | L | A | P | A | S | Q | P | N | S | L | A | D | V | G | S | F | L | G | P | G | V | P | A | A | G | V | P | S | S | L | F | G | M | A | G | Q | V | P | P | L | Q | S | V | T | M | G | G | G | G | G | S | S | T | G | L | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | F | G | A | F | T | N | P | F | T | A | P | A | A | Q | S | P | L | P | S | T | N | P | F | Q | P | N | G | L | A | P | G | P | G | F | G | M | S | S | A | G | P | G | F | P | Q | A | V | P | P | T | G | A | F | A | S | S | F | P | A | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | L | F | P | P | Q | T | P | L | V | Q | Q | Q | N | G | S | S | F | G | D | L | G | S | A | K | L | G | Q | R | P | L | S | Q | P | A | G | I | S | T | N | P | F | M | T | G | P | S | S | S | P | F | A | S | K | P | P | T | T | N | P | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | .
Sequence |  | L
Secondary structure |  |
SS confidence |  |
Disorder |  | ?
Disorder confidence |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c2d9lA_ |

### PDB 2d9l chain A

Region: 24 - 157
Aligned: 129
Modelled: 134
Confidence: 100.0%
Identity: 68%
PDB header:gene regulation
Chain: A: PDB Molecule:nucleoporin-like protein rip;
PDBTitle: solution structure of the arfgap domain of human rip

Phyre2
2 |
| c3lvrE_ |

### PDB 3lvr chain E

Region: 24 - 151
Aligned: 123
Modelled: 128
Confidence: 100.0%
Identity: 19%
PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium

Phyre2
3 |
| c2iqjB_ |

### PDB 2iqj chain B

Region: 24 - 153
Aligned: 122
Modelled: 130
Confidence: 100.0%
Identity: 22%
PDB header:protein transport
Chain: B: PDB Molecule:stromal membrane-associated protein 1-like;
PDBTitle: crystal structure of the gap domain of smap1l (loc64744)2 stromal membrane-associated protein 1-like

Phyre2
4 |
| d1dcqa2 |

### PDB 1dcq chain A domain 2

Region: 25 - 148
Aligned: 119
Modelled: 124
Confidence: 100.0%
Identity: 20%
Fold: ArfGap/RecO-like zinc finger
Superfamily: ArfGap/RecO-like zinc finger
Family: Pyk2-associated protein beta ARF-GAP domain

Phyre2
5 |
| c3fehA_ |

### PDB 3feh chain A

Region: 22 - 160
Aligned: 133
Modelled: 139
Confidence: 100.0%
Identity: 22%
PDB header:hydrolase activator
Chain: A: PDB Molecule:centaurin-alpha-1;
PDBTitle: crystal structure of full length centaurin alpha-1

Phyre2
6 |
| c3jueA_ |

### PDB 3jue chain A

Region: 28 - 150
Aligned: 118
Modelled: 118
Confidence: 100.0%
Identity: 22%
PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1

Phyre2
7 |
| c1dcqA_ |

### PDB 1dcq chain A

Region: 26 - 151
Aligned: 121
Modelled: 126
Confidence: 100.0%
Identity: 20%
PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.

Phyre2
8 |
| c2b0oF_ |

### PDB 2b0o chain F

Region: 26 - 150
Aligned: 120
Modelled: 125
Confidence: 100.0%
Identity: 18%
PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain

Phyre2
9 |
| c2owaB_ |

### PDB 2owa chain B

Region: 22 - 143
Aligned: 113
Modelled: 122
Confidence: 100.0%
Identity: 21%
PDB header:protein transport
Chain: B: PDB Molecule:arfgap-like finger domain containing protein;
PDBTitle: crystal structure of putative gtpase activating protein for2 adp ribosylation factor from cryptosporidium parvum3 (cgd5_1040)

Phyre2
10 |
| c2p57A_ |

### PDB 2p57 chain A

Region: 23 - 142
Aligned: 113
Modelled: 120
Confidence: 100.0%
Identity: 19%
PDB header:metal binding protein
Chain: A: PDB Molecule:gtpase-activating protein znf289;
PDBTitle: gap domain of znf289, an id1-regulated zinc finger protein

Phyre2
11 |
| c3o47A_ |

### PDB 3o47 chain A

Region: 25 - 152
Aligned: 123
Modelled: 128
Confidence: 100.0%
Identity: 24%
PDB header:hydrolase, hydrolase activator
Chain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp-
PDBTitle: crystal structure of arfgap1-arf1 fusion protein

Phyre2
12 |
| c3dwdB_ |

### PDB 3dwd chain B

Region: 24 - 142
Aligned: 110
Modelled: 119
Confidence: 100.0%
Identity: 24%
PDB header:transport protein
Chain: B: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1;
PDBTitle: crystal structure of the arfgap domain of human arfgap1

Phyre2
13 |
| d1u5ka2 |

### PDB 1u5k chain A domain 2

Region: 30 - 141
Aligned: 87
Modelled: 97
Confidence: 96.4%
Identity: 16%
Fold: ArfGap/RecO-like zinc finger
Superfamily: ArfGap/RecO-like zinc finger
Family: RecO C-terminal domain-like

Phyre2
14 |
| c1u5kA_ |

### PDB 1u5k chain A

Region: 29 - 141
Aligned: 88
Modelled: 98
Confidence: 95.7%
Identity: 16%
PDB header:recombination,replication
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: recombinational repair protein reco

Phyre2
15 |
| c3bjiA_ |

### PDB 3bji chain A

Region: 20 - 78
Aligned: 57
Modelled: 59
Confidence: 93.9%
Identity: 14%
PDB header:signaling protein
Chain: A: PDB Molecule:proto-oncogene vav;
PDBTitle: structural basis of promiscuous guanine nucleotide exchange2 by the t-cell essential vav1

Phyre2
16 |
| c1kxuA_ |

### PDB 1kxu chain A

Region: 90 - 144
Aligned: 53
Modelled: 55
Confidence: 82.7%
Identity: 19%
PDB header:regulatory protein
Chain: A: PDB Molecule:cyclin h;
PDBTitle: cyclin h, a positive regulatory subunit of cdk activating kinase

Phyre2
17 |
| c3ihpB_ |

### PDB 3ihp chain B

Region: 37 - 91
Aligned: 55
Modelled: 55
Confidence: 81.1%
Identity: 18%
PDB header:hydrolase
Chain: B: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5;
PDBTitle: covalent ubiquitin-usp5 complex

Phyre2
18 |
| d2ba0d2 |

### PDB 2ba0 chain D domain 2

Region: 76 - 141
Aligned: 49
Modelled: 49
Confidence: 80.4%
Identity: 14%
Fold: Ribonuclease PH domain 2-like
Superfamily: Ribonuclease PH domain 2-like
Family: Ribonuclease PH domain 2-like

Phyre2
19 |
| d1cjya2 |

### PDB 1cjy chain A domain 2

Region: 90 - 143
Aligned: 35
Modelled: 35
Confidence: 78.4%
Identity: 29%
Fold: FabD/lysophospholipase-like
Superfamily: FabD/lysophospholipase-like
Family: Lysophospholipase

Phyre2
20 |
| d2br2b2 |

### PDB 2br2 chain B domain 2

Region: 82 - 143
Aligned: 45
Modelled: 45
Confidence: 77.8%
Identity: 18%
Fold: Ribonuclease PH domain 2-like
Superfamily: Ribonuclease PH domain 2-like
Family: Ribonuclease PH domain 2-like

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |
100 |
101 |
102 |
103 |
104 |
105 |
106 |
107 |
108 |
109 |
110 |
111 |
112 |
113 |
114 |
115 |
116 |
117 |
118 |
119 |
120 |
121 |
122 |
123 |
124 |
125 |
126 |
127 |
128 |
129 |
130 |
131 |
132 |
133 |
134 |
135 |
136 |
137 |
138 |
139 |
140 |
141 |
142 |
143 |
144 |
145 |
146 |
147 |
148 |
149 |
150 |
151 |
152 |
153 |
154 |
155 |
156 |
157 |
158 |
159 |
160 |
161 |
162 |
163 |
164 |
165 |
166 |
167 |
168 |
169 |
170 |
171 |
172 |
173 |
174 |
175 |
176 |
177 |
178 |
179 |
180 |
181 |
182 |
183 |
184 |
185 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2d9lA_ |
|  | 100.0 | 68 | PDB header:gene regulation Chain: A: PDB Molecule:nucleoporin-like protein rip; PDBTitle: solution structure of the arfgap domain of human rip
2 | c3lvrE_ |
|  | 100.0 | 19 | PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
3 | c2iqjB_ |
|  | 100.0 | 22 | PDB header:protein transport Chain: B: PDB Molecule:stromal membrane-associated protein 1-like; PDBTitle: crystal structure of the gap domain of smap1l (loc64744)2 stromal membrane-associated protein 1-like
4 | d1dcqa2 |
|  | 100.0 | 20 | Fold:ArfGap/RecO-like zinc finger Superfamily:ArfGap/RecO-like zinc finger Family:Pyk2-associated protein beta ARF-GAP domain
5 | c3fehA_ |
|  | 100.0 | 22 | PDB header:hydrolase activator Chain: A: PDB Molecule:centaurin-alpha-1; PDBTitle: crystal structure of full length centaurin alpha-1
6 | c3jueA_ |
|  | 100.0 | 22 | PDB header:protein transport/endocytosis Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
7 | c1dcqA_ |
|  | 100.0 | 20 | PDB header:metal binding protein Chain: A: PDB Molecule:pyk2-associated protein beta; PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.
8 | c2b0oF_ |
|  | 100.0 | 18 | PDB header:metal binding protein Chain: F: PDB Molecule:uplc1; PDBTitle: crystal structure of uplc1 gap domain
9 | c2owaB_ |
|  | 100.0 | 21 | PDB header:protein transport Chain: B: PDB Molecule:arfgap-like finger domain containing protein; PDBTitle: crystal structure of putative gtpase activating protein for2 adp ribosylation factor from cryptosporidium parvum3 (cgd5_1040)
10 | c2p57A_ |
|  | 100.0 | 19 | PDB header:metal binding protein Chain: A: PDB Molecule:gtpase-activating protein znf289; PDBTitle: gap domain of znf289, an id1-regulated zinc finger protein
11 | c3o47A_ |
|  | 100.0 | 24 | PDB header:hydrolase, hydrolase activator Chain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp- PDBTitle: crystal structure of arfgap1-arf1 fusion protein
12 | c3dwdB_ |
|  | 100.0 | 24 | PDB header:transport protein Chain: B: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1; PDBTitle: crystal structure of the arfgap domain of human arfgap1
13 | d1u5ka2 |
|  | 96.4 | 16 | Fold:ArfGap/RecO-like zinc finger Superfamily:ArfGap/RecO-like zinc finger Family:RecO C-terminal domain-like
14 | c1u5kA_ |
|  | 95.7 | 16 | PDB header:recombination,replication Chain: A: PDB Molecule:hypothetical protein; PDBTitle: recombinational repair protein reco
15 | c3bjiA_ |
|  | 93.9 | 14 | PDB header:signaling protein Chain: A: PDB Molecule:proto-oncogene vav; PDBTitle: structural basis of promiscuous guanine nucleotide exchange2 by the t-cell essential vav1
16 | c1kxuA_ |
|  | 82.7 | 19 | PDB header:regulatory protein Chain: A: PDB Molecule:cyclin h; PDBTitle: cyclin h, a positive regulatory subunit of cdk activating kinase
17 | c3ihpB_ |
|  | 81.1 | 18 | PDB header:hydrolase Chain: B: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: covalent ubiquitin-usp5 complex
18 | d2ba0d2 |
|  | 80.4 | 14 | Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like
19 | d1cjya2 |
|  | 78.4 | 29 | Fold:FabD/lysophospholipase-like Superfamily:FabD/lysophospholipase-like Family:Lysophospholipase
20 | d2br2b2 |
|  | 77.8 | 18 | Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like
21 | d2g45a1 |
| not modelled | 77.5 | 20 | Fold:RING/U-box Superfamily:RING/U-box Family:Zf-UBP
22 | c2dvkA_ |
| not modelled | 76.6 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0130 protein ape0816; PDBTitle: crystal structure of hypothetical protein from aeropyrum pernix
23 | d1y0ja1 |
| not modelled | 76.1 | 17 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Erythroid transcription factor GATA-1
24 | c2qg3B_ |
| not modelled | 75.5 | 13 | PDB header:unknown function Chain: B: PDB Molecule:upf0130 protein af_2059; PDBTitle: crystal structure of a tyw3 methyltransferase-like protein (af_2059)2 from archaeoglobus fulgidus dsm 4304 at 1.95 a resolution
25 | d2je6b2 |
| not modelled | 74.9 | 20 | Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like
26 | d2djaa1 |
| not modelled | 74.7 | 20 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
27 | c3c5kA_ |
| not modelled | 74.5 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 6; PDBTitle: crystal structure of human hdac6 zinc finger domain
28 | c2junA_ |
| not modelled | 70.9 | 27 | PDB header:ligase Chain: A: PDB Molecule:midline-1; PDBTitle: structure of the mid1 tandem b-boxes reveals an interaction2 reminiscent of intermolecular ring heterodimers
29 | d2dq5a1 |
| not modelled | 70.8 | 27 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
30 | c2egmA_ |
| not modelled | 70.7 | 19 | PDB header:transcription/metal binding protein Chain: A: PDB Molecule:tripartite motif-containing protein 41; PDBTitle: solution structure of the zf-b_box domain from human2 tripartite motif protein 41
31 | c2d8uA_ |
| not modelled | 70.1 | 19 | PDB header:ligase Chain: A: PDB Molecule:ubiquitin ligase trim63; PDBTitle: solution structure of the b-box domain of the human2 tripartite motif-containing 63 protein
32 | d1jkwa1 |
| not modelled | 67.0 | 19 | Fold:Cyclin-like Superfamily:Cyclin-like Family:Cyclin
33 | d5gata_ |
| not modelled | 64.3 | 22 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Erythroid transcription factor GATA-1
34 | c2yrgA_ |
| not modelled | 64.1 | 25 | PDB header:ligase Chain: A: PDB Molecule:tripartite motif-containing protein 5; PDBTitle: solution structure of the b-box domain from tripartite2 motif-containing protein 5
35 | d1gnfa_ |
| not modelled | 59.1 | 17 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Erythroid transcription factor GATA-1
36 | c2it3B_ |
| not modelled | 58.2 | 13 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0130 protein ph1069; PDBTitle: structure of ph1069 protein from pyrococcus horikoshii
37 | c2vrwB_ |
| not modelled | 57.1 | 15 | PDB header:signaling protein Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: critical structural role for the ph and c1 domains of the2 vav1 exchange factor
38 | c2gb5B_ |
| not modelled | 56.1 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:nadh pyrophosphatase; PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution
39 | d2nn6b2 |
| not modelled | 55.8 | 6 | Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like
40 | d2a1ja1 |
| not modelled | 54.9 | 20 | Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like
41 | c3mhsA_ |
| not modelled | 54.4 | 15 | PDB header:hydrolase/transcription regulator/protei Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 8; PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde
42 | c1y1yS_ |
| not modelled | 54.4 | 20 | PDB header:transferase/transcription/dna-rna hybrid Chain: S: PDB Molecule:transcription elongation factor s-ii; PDBTitle: rna polymerase ii-tfiis-dna/rna complex
43 | c2i6yA_ |
| not modelled | 53.2 | 5 | PDB header:lyase Chain: A: PDB Molecule:anthranilate synthase component i, putative; PDBTitle: structure and mechanism of mycobacterium tuberculosis salicylate2 synthase, mbti
44 | c2kgoA_ |
| not modelled | 52.8 | 26 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ybii; PDBTitle: solution nmr structure of zn finger protein ybil from escherichia2 coli. nesg target et107, ocsp target ec0402
45 | d2crga1 |
| not modelled | 52.6 | 13 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain
46 | c2zetD_ |
| not modelled | 52.2 | 19 | PDB header:signaling protein Chain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin
47 | d2dida1 |
| not modelled | 51.8 | 19 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
48 | d2uzga1 |
| not modelled | 51.4 | 15 | Fold:RING/U-box Superfamily:RING/U-box Family:Zf-UBP
49 | d2d8ua1 |
| not modelled | 51.2 | 18 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
50 | c2riqA_ |
| not modelled | 50.9 | 19 | PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: crystal structure of the third zinc-binding domain of human parp-1
51 | d3gata_ |
| not modelled | 50.8 | 15 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Erythroid transcription factor GATA-1
52 | c1nltA_ |
| not modelled | 50.4 | 26 | PDB header:protein transport Chain: A: PDB Molecule:mitochondrial protein import protein mas5; PDBTitle: the crystal structure of hsp40 ydj1
53 | d2idaa1 |
| not modelled | 49.9 | 17 | Fold:RING/U-box Superfamily:RING/U-box Family:Zf-UBP
54 | c3ky9B_ |
| not modelled | 49.8 | 13 | PDB header:apoptosis Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: autoinhibited vav1
55 | d2a2pa1 |
| not modelled | 49.8 | 24 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Selenoprotein W-related
56 | d1hkya_ |
| not modelled | 49.7 | 54 | Fold:Hairpin loop containing domain-like Superfamily:Hairpin loop containing domain-like Family:Pan module (APPLE domain)
57 | d2vuti1 |
| not modelled | 49.7 | 23 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Erythroid transcription factor GATA-1
58 | c1d4uA_ |
| not modelled | 49.2 | 25 | PDB header:dna binding protein Chain: A: PDB Molecule:nucleotide excision repair protein xpa (xpa-mbd); PDBTitle: interactions of human nucleotide excision repair protein2 xpa with rpa70 and dna: chemical shift mapping and 15n nmr3 relaxation studies
59 | d1pjua1 |
| not modelled | 49.1 | 31 | Fold:Plant proteinase inhibitors Superfamily:Plant proteinase inhibitors Family:Plant proteinase inhibitors
60 | c2kdxA_ |
| not modelled | 47.5 | 20 | PDB header:metal-binding protein Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein PDBTitle: solution structure of hypa protein
61 | d2dipa1 |
| not modelled | 47.3 | 18 | Fold:RING/U-box Superfamily:RING/U-box Family:ZZ domain
62 | c1x68A_ |
| not modelled | 47.1 | 20 | PDB header:protein binding Chain: A: PDB Molecule:fhl5 protein; PDBTitle: solution structures of the c-terminal lim domain of human2 fhl5 protein
63 | d2g5fa1 |
| not modelled | 46.6 | 5 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
64 | c1x79C_ |
| not modelled | 46.4 | 28 | PDB header:protein transport Chain: C: PDB Molecule:rab gtpase binding effector protein 1; PDBTitle: crystal structure of human gga1 gat domain complexed with2 the gat-binding domain of rabaptin5
65 | d1cvra2 |
| not modelled | 46.2 | 14 | Fold:Caspase-like Superfamily:Caspase-like Family:Gingipain R (RgpB), N-terminal domain
66 | c2eqrA_ |
| not modelled | 46.1 | 17 | PDB header:transcription Chain: A: PDB Molecule:nuclear receptor corepressor 1; PDBTitle: solution structure of the first sant domain from human2 nuclear receptor corepressor 1
67 | d2bkra1 |
| not modelled | 46.1 | 8 | Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Adenain-like
68 | d1y0pa1 |
| not modelled | 45.8 | 15 | Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Di-heme elbow motif
69 | c1pqvS_ |
| not modelled | 43.2 | 30 | PDB header:transferase/transcription Chain: S: PDB Molecule:transcription elongation factor s-ii; PDBTitle: rna polymerase ii-tfiis complex
70 | c2jvnA_ |
| not modelled | 42.2 | 19 | PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: domain c of human parp-1
71 | d1zbdb_ |
| not modelled | 41.9 | 17 | Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:FYVE, a phosphatidylinositol-3-phosphate binding domain
72 | d1k0ga_ |
| not modelled | 40.6 | 25 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
73 | d1v6za2 |
| not modelled | 40.5 | 20 | Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YggJ C-terminal domain-like
74 | c2j83B_ |
| not modelled | 40.1 | 20 | PDB header:hydrolase Chain: B: PDB Molecule:ulilysin; PDBTitle: ulilysin metalloprotease in complex with batimastat.
75 | c2yusA_ |
| not modelled | 39.8 | 16 | PDB header:transcription Chain: A: PDB Molecule:swi/snf-related matrix-associated actin- PDBTitle: solution structure of the sant domain of human swi/snf-2 related matrix-associated actin-dependent regulator of3 chromatin subfamily c member 1
76 | d1ffya1 |
| not modelled | 39.0 | 12 | Fold:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Superfamily:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Family:Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
77 | d1qdla_ |
| not modelled | 38.8 | 5 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
78 | d2nn6d2 |
| not modelled | 38.8 | 20 | Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like
79 | d1cota_ |
| not modelled | 38.5 | 20 | Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c
80 | d2nllb_ |
| not modelled | 38.1 | 24 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor
81 | c3r07A_ |
| not modelled | 37.3 | 17 | PDB header:transferase Chain: A: PDB Molecule:lipoate-protein ligase a subunit 1; PDBTitle: structural analysis of an archaeal lipoylation system. a bi-partite2 lipoate protein ligase and its e2 lipoyl domain from thermoplasma3 acidophilum
82 | d1fyba1 |
| not modelled | 36.8 | 39 | Fold:Plant proteinase inhibitors Superfamily:Plant proteinase inhibitors Family:Plant proteinase inhibitors
83 | c2hyxA_ |
| not modelled | 36.7 | 16 | PDB header:unknown function Chain: A: PDB Molecule:protein dipz; PDBTitle: structure of the c-terminal domain of dipz from mycobacterium2 tuberculosis
84 | d1tlja_ |
| not modelled | 36.3 | 14 | Fold:SSo0622-like Superfamily:SSo0622-like Family:SSo0622-like
85 | c1tljA_ |
| not modelled | 36.3 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0130 protein sso0622; PDBTitle: crystal structure of conserved protein of unknown function2 sso0622 from sulfolobus solfataricus
86 | c2cszA_ |
| not modelled | 36.0 | 29 | PDB header:signaling protein Chain: A: PDB Molecule:synaptotagmin-like protein 4; PDBTitle: solution structure of the ring domain of the synaptotagmin-2 like protein 4
87 | d2fn0a1 |
| not modelled | 35.2 | 5 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
88 | d1wkqa_ |
| not modelled | 34.9 | 13 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:Deoxycytidylate deaminase-like
89 | c2eblA_ |
| not modelled | 34.8 | 23 | PDB header:transcription Chain: A: PDB Molecule:coup transcription factor 1; PDBTitle: solution structure of the zinc finger, c4-type domain of2 human coup transcription factor 1
90 | d1pfta_ |
| not modelled | 34.1 | 32 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain
91 | c1x64A_ |
| not modelled | 33.7 | 19 | PDB header:contractile protein Chain: A: PDB Molecule:alpha-actinin-2 associated lim protein; PDBTitle: solution structure of the lim domain of alpha-actinin-22 associated lim protein
92 | d2cora1 |
| not modelled | 33.6 | 17 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain
93 | d2csva1 |
| not modelled | 33.3 | 18 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
94 | d1lc5a_ |
| not modelled | 33.1 | 15 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like
95 | c3h9mA_ |
| not modelled | 32.9 | 12 | PDB header:lyase Chain: A: PDB Molecule:p-aminobenzoate synthetase, component i; PDBTitle: crystal structure of para-aminobenzoate synthetase,2 component i from cytophaga hutchinsonii
96 | c2difA_ |
| not modelled | 32.1 | 17 | PDB header:protein binding Chain: A: PDB Molecule:tripartite motif protein 39; PDBTitle: one sequence two fold ? : miss fold of the zf-b-box domain2 from human tripartite motif protein 39
97 | d1qypa_ |
| not modelled | 32.1 | 20 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain
98 | c1xt5A_ |
| not modelled | 32.0 | 16 | PDB header:immune system Chain: A: PDB Molecule:variable region-containing chitin-binding PDBTitle: crystal structure of vcbp3, domain 1, from branchiostoma2 floridae
99 | d1dl6a_ |
| not modelled | 31.6 | 21 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain
100 | c3tsuA_ |
| not modelled | 31.5 | 26 | PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate
101 | d1unld_ |
| not modelled | 30.9 | 38 | Fold:Cyclin-like Superfamily:Cyclin-like Family:Cyclin
102 | c1l4aE_ |
| not modelled | 30.8 | 20 | PDB header:endocytosis/exocytosis Chain: E: PDB Molecule:synaphin a; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei
103 | c1unhD_ |
| not modelled | 30.3 | 38 | PDB header:cell cycle Chain: D: PDB Molecule:cyclin-dependent kinase 5 activator 1; PDBTitle: structural mechanism for the inhibition of cdk5-p25 by2 roscovitine, aloisine and indirubin.
104 | d1tiha_ |
| not modelled | 30.1 | 39 | Fold:Plant proteinase inhibitors Superfamily:Plant proteinase inhibitors Family:Plant proteinase inhibitors
105 | d1ynwa1 |
| not modelled | 29.8 | 25 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor
106 | c3pkiF_ |
| not modelled | 29.7 | 40 | PDB header:hydrolase Chain: F: PDB Molecule:nad-dependent deacetylase sirtuin-6; PDBTitle: human sirt6 crystal structure in complex with adp ribose
107 | c3jyvN_ |
| not modelled | 29.6 | 22 | PDB header:ribosome Chain: N: PDB Molecule:40s ribosomal protein s29(a); PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution
108 | d2fc7a1 |
| not modelled | 29.6 | 26 | Fold:RING/U-box Superfamily:RING/U-box Family:ZZ domain
109 | c2darA_ |
| not modelled | 29.6 | 25 | PDB header:metal binding protein Chain: A: PDB Molecule:pdz and lim domain protein 5; PDBTitle: solution structure of first lim domain of enigma-like pdz2 and lim domains protein
110 | c1cvrA_ |
| not modelled | 29.5 | 13 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:gingipain r; PDBTitle: crystal structure of the arg specific cysteine proteinase gingipain r2 (rgpb)
111 | d1hcqa_ |
| not modelled | 29.3 | 24 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Nuclear receptor
112 | c1oahA_ |
| not modelled | 29.2 | 19 | PDB header:reductase Chain: A: PDB Molecule:cytochrome c nitrite reductase; PDBTitle: cytochrome c nitrite reductase from desulfovibrio2 desulfuricans atcc 27774: the relevance of the two3 calcium sites in the structure of the catalytic subunit4 (nrfa).
113 | d1oaha_ |
| not modelled | 29.2 | 19 | Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Di-heme elbow motif
114 | c2gamA_ |
| not modelled | 28.6 | 16 | PDB header:transferase Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase; PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac
115 | d1ce3a_ |
| not modelled | 28.3 | 35 | Fold:Plant proteinase inhibitors Superfamily:Plant proteinase inhibitors Family:Plant proteinase inhibitors
116 | d1i7qa_ |
| not modelled | 27.8 | 19 | Fold:ADC synthase Superfamily:ADC synthase Family:ADC synthase
117 | c1qh2B_ |
| not modelled | 27.5 | 36 | PDB header:hydrolase inhibitor Chain: B: PDB Molecule:protein (trypsin inhibitor c2); PDBTitle: chymotrypsin inhibitor (c2) from nicotiana alata
118 | c2d8xA_ |
| not modelled | 27.4 | 25 | PDB header:structural protein, cell cycle Chain: A: PDB Molecule:protein pinch; PDBTitle: solution structure of the second lim domain of particularly2 interesting new cys-his protein (pinch)
119 | d2o9ca1 |
| not modelled | 27.4 | 13 | Fold:Profilin-like Superfamily:GAF domain-like Family:GAF domain
120 | c3bvoA_ |
| not modelled | 27.3 | 50 | PDB header:chaperone Chain: A: PDB Molecule:co-chaperone protein hscb, mitochondrial precursor; PDBTitle: crystal structure of human co-chaperone protein hscb

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite