Phyre 2 alignment of O95081 with d1wgxa_

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Job Description | O95081
Confidence | 26.72% | Date | Wed May 9 18:00:30 BST 2012
Rank | 125 | Aligned Residues | 48
% Identity | 10% | Template | d1wgxa_
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Myb/SANT domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |  |  |  |  | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | S | I | S | M | T | T | F | T | E | P | E | V | V | F | L | Q | S | R | G | N | E | V | C | R | K | I | W | L | G | L | . | . | . | . | F | D | A | R | T | S | L | V | P | D | S | R | D | P | Q | K | V | K | E | F | L | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | S | S | G | D | K | E | W | N | E | K | E | L | Q | K | L | . | . | . | . | . | H | C | A | F | A | S | L | P | K | H | K | P | G | F | W | S | E | V | A | A | A | V | G | S | R | S | P | E | E | C | Q | R | K | Y | M | E
Template Known Secondary structure |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  | S |  | S | S | S | S | S |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . |  |  |  |  |  | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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