Phyre 2 alignment of O95081 with c1m2vB_

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Job Description | O95081
Confidence | 20.93% | Date | Wed May 9 18:00:30 BST 2012
Rank | 174 | Aligned Residues | 24
% Identity | 25% | Template | c1m2vB_
PDB info | PDB header:protein transport | Chain: B: PDB Molecule:protein transport protein sec24; | PDBTitle: crystal structure of the yeast sec23/24 heterodimer
Resolution | 2.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 46 | . | . | . | 50 | . | . |  | . | . | . | . | . | . | . | 60 | . | . | . |  |  | . | . | . | . | . | . | 70
Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Query Sequence |  | H | C | F | E | C | A | Q | . | R | G | V | T | Y | V | D | I | T | V | G | . | . | S | F | V | C | T | T | C
Query Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | C | R | R | C | R | S | Y | M | N | P | . | F | V | T | F | I | E | Q | G | R | R | W | R | C | N | F | C
Template Known Secondary structure |  | B |  | S | S | S |  |  | B |  |  | T | . | T |  |  |  |  | T | T | T | T |  |  |  |  | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 230 | . | . | . | . | . | . | . | . | . | 240 |  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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