Return to main results Retrieve Phyre Job Id

Job DescriptionA0PK11
Confidence5.43%DateFri May 25 09:41:56 BST 2012
Rank14Aligned Residues106
% Identity12%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 








Query SS confidence 















































































Query Sequence  LNAGLHVMILLLLFLALALALVSMGFAILNMIQVPYRAVSGPGGICLWNVLAGGVVALAIASFVAAVKFHDLTERIANFQ
Query Conservation      
    
 

  


  
 
  
   
  


     

 


  
 

     
  
   
      

 

    
Alig confidence 












































..






















..........
Template Conservation                 
                       
   
 ..        
        
 
   ..........
Template Sequence  PAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF. . TGLFGYLGGSVAASAIVGYTVDF. . . . . . . . . .
Template Known Secondary structure 
TT
TTS
TT..S..........
Template Predicted Secondary structure 





............
Template SS confidence 















































































   343......350.........360.........370.........380....... ..390.........400.........410
 
   173......180.........190.........200.........210.........220..
Predicted Secondary structure 





















Query SS confidence 

















































Query Sequence  EKLFQFVVVEEQYEESFWICVASASAHAANLVVVAISQIPLPEIKTKIEE
Query Conservation              






      
 

 
  
                
Alig confidence  ............





































Template Conservation  ............ 
                                   
Template Sequence  . . . . . . . . . . . . FGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE
Template Known Secondary structure  ............S
SGGGGG
Template Predicted Secondary structure  ............




Template SS confidence 

















































   411........420.........430.........440........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions