Job Description A0PK11 Confidence 5.15% Date Fri May 25 09:41:56 BST 2012 Rank 16 Aligned Residues 104 % Identity 11% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		A	L	A	L	A	L	V	S	M	G	F	A	I	L	N	M	I	Q	V	P	Y	R	A	V	S	G	P	G	G	I	C	L	W	N	V	L	A	G	G	V	V	A	L	A	I	A	S	F	V	A	A	V	K	F	H	D	L	T	E	R	I	A	N	F	Q	E	K	L	F	Q	F	V	V	V	E	E	Q	Y	.	.
Query Conservation																																																																																.	.
Alig confidence																																.	.	.	.	.																																												.	.
Template Conservation																																.	.	.	.	.
Template Sequence		G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	.	.	.	.	.	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G
Template Known Secondary structure																		S	S	T	T						T	T		S		.	.	.	.	.																						T	T	S																				T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	F	W	I	C	V	A	S	A	S	A	H	A	A	N	L	V	V	V	A	I	S	Q	I	P	L	P	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A	G	E
Template Known Secondary structure		T	S																												S	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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