Return to main results Retrieve Phyre Job Id

Job DescriptionA0PK11
Confidence1.94%DateFri May 25 09:41:56 BST 2012
Rank86Aligned Residues23
% Identity4%Templatec2da7A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:zinc finger homeobox protein 1b; PDBTitle: solution structure of the homeobox domain of zinc finger2 homeobox protein 1b (smad interacting protein 1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   205....210.........220.......
Predicted Secondary structure 

















Query SS confidence 






















Query Sequence  VVAISQIPLPEIKTKIEEATVTA
Query Conservation   
                     
Alig confidence 






















Template Conservation 
  

 



        
 
 
Template Sequence  VKEWFEQRKVYQYSNSRSGPSSG
Template Known Secondary structure  S
SSS

S

Template Predicted Secondary structure 








Template SS confidence 






















   4950.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions