Job Description Q13882 Confidence 100.00% Date Wed May 9 17:41:40 BST 2012 Rank 43 Aligned Residues 273 % Identity 36% Template c3plsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage-stimulating protein receptor; PDBTitle: ron in complex with ligand amp-pnp Resolution 2.24 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																							.	.																					.	.	.	.											.
Query SS confidence																							.	.																					.	.	.	.											.
Query Sequence		E	P	E	P	L	P	H	W	D	D	W	E	R	P	R	E	E	F	T	L	C	.	.	R	K	L	G	S	G	Y	F	G	E	V	F	E	G	L	W	K	D	R	V	.	.	.	.	Q	V	A	I	K	V	I	S	R	D	.	N	L	L	H	Q	Q	M	L	Q	S	E	I	Q	A	M	K	K	L	R	H	K	H
Query Conservation																							.	.																					.	.	.	.											.
Alig confidence																							.	.																					.	.	.	.											.
Template Conservation
Template Sequence		D	S	A	L	L	A	E	V	K	D	V	L	I	P	H	E	R	V	V	T	H	S	D	R	V	I	G	K	G	H	F	G	V	V	Y	H	G	E	Y	I	D	Q	A	Q	N	R	I	Q	C	A	I	K	S	L	S	R	I	T	E	M	Q	Q	V	E	A	F	L	R	E	G	L	L	M	R	G	L	N	H	P	N
Template Known Secondary structure									T	G	G	G	B			G	G	G													T	T											S	S	S											T	T			S																T				T	T
Template Predicted Secondary structure
Template SS confidence
		1063	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.
		247	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		I	L	A	L	Y	A	V	V	S	.	V	G	D	P	V	Y	I	I	T	E	L	M	A	K	G	S	L	L	E	L	L	R	D	S	D	E	K	V	L	P	V	S	E	L	L	D	I	A	W	Q	V	A	E	G	M	C	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	I	L	V	G	E	N	T	L
Query Conservation											.
Alig confidence											.																												.
Template Conservation																																							.
Template Sequence		V	L	A	L	I	G	I	M	L	P	P	E	G	L	P	H	V	L	L	P	Y	M	C	H	G	D	L	L	Q	F	I	R	S	P	Q	R	N	.	P	T	V	K	D	L	I	S	F	G	L	Q	V	A	R	G	M	E	Y	L	A	E	Q	K	F	V	H	R	D	L	A	A	R	N	C	M	L	D	E	S	F	T
Template Known Secondary structure		B										S	S	S										T	T		B								T	T			.		B																					T	T				S			S	G	G	G					T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		1143	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.		1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.
		326	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		C	K	V	G	D	F	G	L	A	R	L	I	K	.	.	.	.	E	D	V	Y	L	S	H	D	H	N	I	P	Y	K	W	T	A	P	E	A	L	S	R	G	H	Y	S	T	K	S	D	V	W	S	F	G	I	L	L	H	E	M	F	S	R	G	Q	V	P	Y	P	G	M	S	N	H	E	A	F	L	R	V	D
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		V	K	V	A	D	F	G	L	A	R	D	I	L	D	R	E	Y	Y	S	V	Q	Q	H	R	H	A	R	L	P	V	K	W	T	A	L	E	S	L	Q	T	Y	R	F	T	T	K	S	D	V	W	S	F	G	V	L	L	W	E	L	L	T	R	G	A	P	P	Y	R	H	I	D	P	F	D	L	T	H	F	L	A
Template Known Secondary structure							T	T	S	S		T	T	T	T	G	G	G	G		S			S	S		T	T		G	G	G	G	S						T	T																						T	S			T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		1222	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Y	R	M	P	C	P	L	E	C	P	P	S	V	H	K	L	M	L	T	C	W	C	R	D	P	E	Q	R	P	C	F	K	A	L	R	E	R	L	S	S	F	T	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	R	R	L	P	Q	P	E	Y	C	P	D	S	L	Y	Q	V	M	Q	Q	C	W	E	A	D	P	A	V	R	P	T	F	R	V	L	V	G	E	V	E	Q	I	V	S	A
Template Known Secondary structure		T	T							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1302	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions