Job Description Q13882 Confidence 100.00% Date Wed May 9 17:41:40 BST 2012 Rank 171 Aligned Residues 283 % Identity 25% Template c3mdyC_ PDB info PDB header:transferase/isomerase Chain: C: PDB Molecule:bone morphogenetic protein receptor type-1b; PDBTitle: crystal structure of the cytoplasmic domain of the bone morphogenetic2 protein receptor type-1b (bmpr1b) in complex with fkbp12 and ldn-3 193189 Resolution 2.05 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	P	E	L	V	N	Y	H	R	A	Q	S	L	S	H	G	L	R	L	A	A	P	C	R	K	H	E	P	E	P	L	P	H	W	D	D	W	E	R	P	R	E	E	F	T	L	C	R	K	L	G	S	G	Y	F	G	E	V	F	E	G	L	W	K	D	R	V	Q	V	A	I	K	V	I	S	R	D	N
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		E	S	L	R	D	L	I	E	Q	S	Q	S	S	G	S	G	S	G	L	P	L	L	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	I	A	K	Q	I	Q	M	V	K	Q	I	G	K	G	R	Y	G	E	V	W	M	G	K	W	R	G	.	E	K	V	A	V	K	V	F	F	T	T	E
Template Known Secondary structure																S		S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T															T	T									T	T	.										G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		L	L	H	Q	Q	M	L	Q	S	E	I	Q	A	M	K	K	L	R	H	K	H	I	L	A	L	Y	A	V	V	S	V	G	.	.	.	.	D	P	V	Y	I	I	T	E	L	M	A	K	G	S	L	L	E	L	L	R	D	S	D	E	K	V	L	P	V	S	E	L	L	D	I	A	W	Q	V	A	E	G	M	C
Query Conservation																																		.	.	.	.
Alig confidence		.																																.	.	.	.
Template Conservation		.
Template Sequence		.	E	A	S	W	F	R	E	T	E	I	Y	Q	T	V	L	M	R	H	E	N	I	L	G	F	I	A	A	D	I	K	G	T	G	S	W	T	Q	L	Y	L	I	T	D	Y	H	E	N	G	S	L	Y	D	Y	L	K	S	T	T	L	D	A	K	S	M	L	K	L	A	Y	S	S	V	S	G	L	C	H	L	H
Template Known Secondary structure		.												T	S	T	T				T	T	B										S		G	G	G											T	T		B										B
Template Predicted Secondary structure		.
Template SS confidence
			238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		302	.						.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.							.	.	.	.	.	.	.	370
Predicted Secondary structure				.	.	.	.	.																																																												.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																																																												.	.	.	.	.	.
Query Sequence		Y	L	.	.	.	.	.	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	I	L	V	G	E	N	T	L	C	K	V	G	D	F	G	L	A	R	L	I	K	E	D	V	Y	L	S	H	D	H	N	I	P	Y	K	W	T	A	P	E	A	L	S	R	G	.	.	.	.	.	.	H	Y	S	T	K	S	D	V
Query Conservation				.	.	.	.	.																																																												.	.	.	.	.	.
Alig confidence				.	.	.	.	.																																														.	.	.												.	.	.	.	.	.
Template Conservation																																																						.	.	.
Template Sequence		T	E	I	F	S	T	Q	G	K	P	A	I	A	H	R	D	L	K	S	K	N	I	L	V	K	K	N	G	T	C	C	I	A	D	L	G	L	A	V	K	F	I	I	P	P	N	T	R	V	G	T	K	.	.	.	R	Y	M	P	P	E	V	L	D	E	S	L	N	R	N	H	F	Q	S	Y	I	M	A	D	M
Template Known Secondary structure		S		B		S	T	T		B						S				G	G	G					T	T	S								T	T										S	S		S		G	.	.	.	G	G							T	S				T	T		T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.																.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.							.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		W	S	F	G	I	L	L	H	E	M	F	S	R	G	Q	V	P	Y	P	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	H	E	A	F	L	R	V	D	A	G	Y	R	M	P	C	P	L	E	.	.	.	.	.	.	C	P	P	S	V	H	K	L	M	L	T	C	W	C	R	D	P	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence														.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation														.
Template Sequence		Y	S	F	G	L	I	L	W	E	V	A	R	.	R	C	V	S	G	G	I	V	E	E	Y	Q	L	P	Y	H	D	L	V	P	S	D	P	S	Y	E	D	M	R	E	I	V	C	I	K	K	L	R	P	S	F	P	N	R	W	S	S	D	E	C	L	R	Q	M	G	K	L	M	T	E	C	W	A	H	N	P	A
Template Known Secondary structure													T	.	T	B		B	T	T	B							T	T	T	T	T	S		S	S											T	T	S								G	G	G	G	G															S		S	S	G	G
Template Predicted Secondary structure														.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	P	C	F	K	A	L	R	E	R	L	S	S	F	T	S	Y	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	L	T	A	L	R	V	K	K	T	L	A	K	M	S	E	S	Q	D
Template Known Secondary structure		G	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions