Job Description Q13882 Confidence 99.83% Date Wed May 9 17:41:40 BST 2012 Rank 362 Aligned Residues 85 % Identity 18% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																.												.	.
Query SS confidence																																																.												.	.
Query Sequence		S	E	P	W	F	F	G	C	I	S	R	S	E	A	V	R	R	L	Q	A	E	G	N	A	T	G	A	F	L	I	R	V	S	E	K	P	S	A	D	Y	V	L	S	V	R	D	.	T	Q	A	V	R	H	Y	K	I	W	R	.	.	R	A	G	G	R	L	H	L	N	E	A	V	S	F	L	S	L	P	E	L
Query Conservation																																																.												.	.
Alig confidence								.															.	.																								.												.	.
Template Conservation								.															.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	.	.	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I
Template Known Secondary structure		T		T	T	B		.												T	T	S	.	.		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure								.															.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	Y	H	R	A	Q	S	L	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	E	Y	L	Q	N	K	I	R	L
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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