Job Description Q13882 Confidence 100.00% Date Wed May 9 17:41:40 BST 2012 Rank 76 Aligned Residues 238 % Identity 24% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		195	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure												.																																							.
Query SS confidence												.																																							.
Query Sequence		R	K	L	G	S	G	Y	F	G	E	.	V	F	E	G	L	W	K	D	R	V	Q	V	A	I	K	V	I	S	R	D	N	L	L	H	Q	Q	M	L	Q	S	E	I	Q	A	M	K	K	L	.	R	H	K	H	I	L	A	L	Y	A	V	V	S	V	G	D	P	V	Y	I	I	T	E	L	M	A	K	G	S	L
Query Conservation												.																																							.
Alig confidence												.									.										.	.	.																		.																											.
Template Conservation																					.										.	.	.																																													.
Template Sequence		K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	Q	G	.	R	P	V	A	V	K	R	M	L	.	.	.	I	D	F	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C	S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	.	L	N	L
Template Known Secondary structure								T	T	T								S	S	S	.										.	.	.	G	G	G															T	T	S	T	T	B										T	T										S	.
Template Predicted Secondary structure																					.										.	.	.																																													.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.		.	.	.	700	.	.	.	.	.				.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.		750	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.														.	.	.	.	330	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	L	L	R	D	S	D	E	K	V	L	P	V	S	E	.	.	.	.	.	L	L	D	I	A	W	Q	V	A	E	G	M	C	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	I	L	V	G	E	N	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	V	G	D	F	G	L	A
Query Conservation																		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C
Template Known Secondary structure						T			S		S	T	T						S	S																				T	T							S	T	T	T											S			S	S		S							B				S	S
Template Predicted Secondary structure
Template SS confidence
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
		335	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure									.																					.	.	.																																												.	.	.	.	.	.
Query SS confidence									.																					.	.	.																																												.	.	.	.	.	.
Query Sequence		R	L	I	K	E	D	V	.	Y	L	S	H	D	H	N	I	P	Y	K	W	T	A	P	E	A	L	S	R	.	.	.	G	H	Y	S	T	K	S	D	V	W	S	F	G	I	L	L	H	E	M	F	S	R	G	Q	V	P	Y	P	G	M	S	N	H	E	A	F	L	R	V	D	A	G	Y	.	.	.	.	.	.
Query Conservation									.																					.	.	.																																												.	.	.	.	.	.
Alig confidence									.																					.	.	.																													.	.														.	.	.	.	.	.
Template Conservation																																																													.	.
Template Sequence		K	K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	S	G	W	R	A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	.	.	D	K	Y	S	R	E	S	N	I	I	R	G	I	F	S	L	D	E	M
Template Known Secondary structure					T	T	T									S	G	G	G	G	G							S	T	T	T						T																T	T	S			T	T		.	.	S											T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		833	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.			.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	P	C	P	L	E	C	P	P	S	V	H	K	L	M	L	T	C	W	C	R	D	P	E	Q	R	P	C	F	K	A	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	L	R
Template Known Secondary structure		T	T																		T		S	S	T	T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		942	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions