Job Description Q13882 Confidence 100.00% Date Wed May 9 17:41:40 BST 2012 Rank 21 Aligned Residues 259 % Identity 40% Template c3dpkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor Resolution 1.95 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																						.	.	.											.																			.
Query SS confidence																																						.	.	.											.																			.
Query Sequence		P	H	W	D	D	W	E	R	P	R	E	E	F	T	L	C	R	K	L	G	S	G	Y	F	G	E	V	F	E	G	L	W	K	D	R	V	.	.	.	Q	V	A	I	K	V	I	S	R	D	.	N	L	L	H	Q	Q	M	L	Q	S	E	I	Q	A	M	K	K	L	.	R	H	K	H	I	L	A	L	Y	A	V
Query Conservation																																						.	.	.											.																			.
Alig confidence																																						.	.	.											.																			.
Template Conservation
Template Sequence		P	Y	N	E	K	W	E	F	P	R	N	N	L	Q	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	F	G	L	G	A	V	L	K	V	A	V	K	M	L	K	S	T	A	H	A	D	E	K	E	A	L	M	S	E	L	K	I	M	S	H	L	G	Q	H	E	N	I	V	N	L	L	G	A
Template Known Secondary structure					G	G	G	B			G	G	G											S	S										S														T	T																							T	T	B
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	V	G	D	P	V	Y	I	I	T	E	L	M	A	K	G	S	L	L	E	L	L	R	D	S	D	E	K	V	L	P	V	S	E	L	L	D	I	A	W	Q	V	A	E	G	M	C	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	I	L	V	G	E	N	T	L	C	K	V	G	D	F	G	L
Query Conservation
Alig confidence																												.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		C	T	H	G	G	P	V	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	Q	.	.	.	.	L	S	S	R	D	L	L	H	F	S	S	Q	V	A	Q	G	M	A	F	L	A	S	K	N	C	I	H	R	D	V	A	A	R	N	V	L	L	T	N	G	H	V	A	K	I	G	D	F	G	L
Template Known Secondary structure				S	S	S	S									T	T											.	.	.	.																							T	T				S			S	G	G	G					G	G	G								T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.					.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	R	L	I	K	E	D	V	Y	L	S	H	D	H	N	I	P	Y	K	W	T	A	P	E	A	L	S	R	G	H	Y	S	T	K	S	D	V	W	S	F	G	I	L	L	H	E	M	F	S	R	G	Q	V	P	Y	P	G	M	S	N	H	E	A	F	.	L	R	V	D	A	G	Y	R	M	P	C	P	L	E	C
Query Conservation																																																																		.
Alig confidence																	.	.																																																.
Template Conservation																	.	.
Template Sequence		A	R	D	I	M	N	D	S	N	Y	I	V	R	L	P	.	.	V	K	W	M	A	P	E	S	I	F	D	C	V	Y	T	V	Q	S	D	V	W	S	Y	G	I	L	L	W	E	I	F	S	L	G	L	N	P	Y	P	G	I	L	V	N	S	K	F	Y	K	L	V	K	D	G	Y	Q	M	A	Q	P	A	F	A
Template Known Secondary structure		T	S		G	G	G		T	T	S	B			B		.	.	G	G	G	S																												T	T	S			S	S	T	T			S	S									T	T							T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.			.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	S	V	H	K	L	M	L	T	C	W	C	R	D	P	E	Q	R	P	C	F	K	A	L	R	E	R	L	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	N	I	Y	S	I	M	Q	A	C	W	A	L	E	P	T	H	R	P	T	F	Q	Q	I	C	S	F	L	Q	E
Template Known Secondary structure													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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