Job Description Q13882 Confidence 100.00% Date Wed May 9 17:41:40 BST 2012 Rank 165 Aligned Residues 242 % Identity 20% Template c3dlsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp Resolution 2.30 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																			.	.	.	.	.	.	.	.
Query SS confidence																									.																			.	.	.	.	.	.	.	.
Query Sequence		E	E	F	T	L	C	R	K	L	G	S	G	Y	F	G	E	V	F	E	G	L	W	K	.	D	R	V	Q	V	A	I	K	V	I	S	R	D	N	L	L	H	Q	.	.	.	.	.	.	.	.	Q	M	L	Q	S	E	I	Q	A	M	K	K	L	R	H	K	H	I	L	A	L	Y	A	V	V	S	V	G	D	P
Query Conservation																									.																			.	.	.	.	.	.	.	.
Alig confidence																									.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	Y	S	T	M	S	P	L	G	S	G	A	F	G	F	V	W	T	A	V	D	K	E	K	N	K	E	V	V	V	K	F	I	K	K	E	K	V	L	E	D	C	W	I	E	D	P	K	L	G	K	V	T	L	E	I	A	I	L	S	R	V	E	H	A	N	I	I	K	V	L	D	I	F	E	N	Q	G	F
Template Known Secondary structure											S	S	S	S	S		S							T	T	T	T										S	T	T	S		T	T	S					T	T	T											T	T				T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		997	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	I	I	T	E	L	M	A	K	G	S	L	L	E	L	L	R	D	S	D	E	K	V	L	P	V	S	E	L	L	D	I	A	W	Q	V	A	E	G	M	C	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	I	L	V	G	E	N	T	L	C	K	V	G	D	F	G	L	A	R	L	I	K	E
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		F	Q	L	V	M	E	K	H	G	S	G	L	D	L	F	A	F	I	D	R	H	P	R	.	L	D	E	P	L	A	S	Y	I	F	R	Q	L	V	S	A	V	G	Y	L	R	L	K	D	I	I	H	R	D	I	K	D	E	N	I	V	I	A	E	D	F	T	I	K	L	I	D	F	G	S	A	A	Y	L	E	R
Template Known Secondary structure										T	T	S		B							T				.																							T	T				S			S	G	G	G					T	T	S								T	T						T
Template Predicted Secondary structure																									.
Template SS confidence
		1077	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.		1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	Y	L	S	H	D	H	N	I	P	Y	K	W	T	A	P	E	A	L	S	R	G	H	Y	S	T	K	S	D	V	W	S	F	G	I	L	L	H	E	M	F	S	R	G	Q	V	P	Y	P	G	M	S	N	H	E	A	F	L	R	V	D	A	G	Y	R	M	P	C	P	L	E	C	P	P	S	V	H	K	L
Query Conservation
Alig confidence																																													.											.	.	.	.	.	.	.
Template Conservation																																													.											.	.	.	.	.	.	.
Template Sequence		G	K	L	F	Y	T	F	C	G	T	I	E	Y	C	A	P	E	V	L	M	G	N	P	Y	R	G	P	E	L	E	M	W	S	L	G	V	T	L	Y	T	L	V	F	.	E	E	N	P	F	C	E	L	E	E	.	.	.	.	.	.	.	T	V	E	A	A	I	H	P	P	Y	L	V	S	K	E	L	M	S	L
Template Known Secondary structure		T			B		S			S		G	G	G							T	T			B		S																		.	S	S		S		S	S	G	G	G	.	.	.	.	.	.	.	G	T	T	T					S	S
Template Predicted Secondary structure																																													.											.	.	.	.	.	.	.
Template SS confidence
		1156	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.		.	1200	.	.	.	.	.	.	.	.								.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	T	C	W	C	R	D	P	E	Q	R	P	C	F	K	A	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	G	L	L	Q	P	V	P	E	R	R	T	T	L	E	K	L	V	T
Template Known Secondary structure						T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1228	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions