Job Description Q13882 Confidence 100.00% Date Wed May 9 17:41:40 BST 2012 Rank 275 Aligned Residues 239 % Identity 25% Template c3coiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mitogen-activated protein kinase 13; PDBTitle: crystal structure of p38delta kinase Resolution 2.09 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																														.																				.	.																												.	.	.
Query SS confidence																														.																				.	.																												.	.	.
Query Sequence		W	E	R	P	R	E	E	F	T	L	C	R	K	L	G	S	G	Y	F	G	E	V	F	E	G	L	W	K	.	D	R	V	Q	V	A	I	K	V	I	S	R	D	N	L	L	H	Q	Q	.	.	M	L	Q	S	E	I	Q	A	M	K	K	L	R	H	K	H	I	L	A	L	Y	A	V	V	S	V	G	.	.	.
Query Conservation																														.																				.	.																												.	.	.
Alig confidence						.																								.																				.	.																												.	.	.
Template Conservation						.
Template Sequence		W	E	L	P	.	K	T	Y	V	S	P	T	H	V	G	S	G	A	Y	G	S	V	C	S	A	I	D	K	R	S	G	E	K	V	A	I	K	K	L	S	R	P	F	Q	S	E	I	F	A	K	R	A	Y	R	E	L	L	L	L	K	H	M	Q	H	E	N	V	I	G	L	L	D	V	F	T	P	A	S	S	L
Template Known Secondary structure						.	T	T											S	S									T	T	T	T									S	S	T	T	S	S																				T	T	B				S					S		S	S	G
Template Predicted Secondary structure						.
Template SS confidence
		19	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
					258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	P	V	Y	I	I	T	E	L	M	A	K	G	S	L	L	E	L	L	R	D	S	D	E	K	V	L	P	V	S	E	L	L	D	I	A	W	Q	V	A	E	G	M	C	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	I	L	V	G	E	N	T	L	C	K	V	G	D	F	G	L	A
Query Conservation		.	.	.
Alig confidence		.	.	.																						.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		R	N	F	Y	D	F	Y	L	V	M	P	F	M	Q	T	D	L	Q	K	I	M	G	L	K	.	.	.	.	.	F	S	E	E	K	I	Q	Y	L	V	Y	Q	M	L	K	G	L	K	Y	I	H	S	A	G	V	V	H	R	D	L	K	P	G	N	L	A	V	N	E	D	C	E	L	K	I	L	D	F	G	L	A
Template Known Secondary structure		G	G												S			G	G	G	T	T	T	S		.	.	.	.	.																							T	T				S	S			G	G	G					T	T							S	T	T		T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		R	L	I	K	E	D	V	Y	L	S	H	D	H	N	I	P	Y	K	W	T	A	P	E	A	L	S	R	G	H	Y	S	T	K	S	D	V	W	S	F	G	I	L	L	H	E	M	F	S	R	G	Q	V	P	Y	P	G	M	S	N	H	E	A	F	L	R	V	D	A	G	Y	R	M	P	C	P	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																.																											.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		R	H	V	V	T	R	W	.	.	.	.	.	.	.	.	.	.	Y	R	A	P	E	V	I	L	S	W	M	H	Y	N	Q	T	V	D	I	W	S	V	G	C	I	M	A	E	M	L	T	.	G	K	T	L	F	K	G	K	D	Y	L	D	Q	L	T	Q	I	L	K	V	T	G	V	P	G	T	E	F	V	Q	K
Template Known Secondary structure		T				S	B		.	.	.	.	.	.	.	.	.	.		S						S			S				T	T																.	S	S		S	S	B	S	S															B							T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
		173	.	.	.	.	.	.											180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
																											410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	C	P	P	S	V	H	K	L	M	L	T	C	W	C	R	D	P	E	Q	R	P	C	F	K	A	L	R	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	D	K	A	A	K	S	Y	I	Q	S	L	P	Q	T	P	R	K	D	F	T	Q	L	F	P	R	A	S	P	Q	A	A	D	L	L	E	K	M	L	E	L	D	V	D	K	R	L	T	A	A	Q	A	L	T
Template Known Secondary structure			S										T	S		B		S	S			T	T	T	T		T	T	S												S		S		T	T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions