Job Description Q13882 Confidence 100.00% Date Wed May 9 17:41:40 BST 2012 Rank 244 Aligned Residues 221 % Identity 27% Template c3alnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp Resolution 2.30 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.																		.	.
Query SS confidence																																.																		.	.
Query Sequence		D	D	W	E	R	P	R	E	E	F	T	L	C	R	K	L	G	S	G	Y	F	G	E	V	F	E	G	L	W	K	.	D	R	V	Q	V	A	I	K	V	I	S	R	D	N	L	L	H	.	.	Q	Q	M	L	Q	S	E	I	Q	A	M	K	K	L	R	H	K	H	I	L	A	L	Y	A	V	V	S	V	G	D
Query Conservation																																.																		.	.
Alig confidence																																.																		.	.
Template Conservation
Template Sequence		Q	H	W	D	F	T	A	E	D	L	K	D	L	G	E	I	G	R	G	A	Y	G	S	V	N	K	M	V	H	K	P	S	G	Q	I	M	A	V	K	R	I	R	S	T	V	D	E	K	E	Q	K	Q	L	L	M	D	L	D	V	V	M	R	S	S	D	C	P	Y	I	V	Q	F	Y	G	A	L	F	R	E	G
Template Known Secondary structure								T	T	S				.							S	S									T	T	T															S															T		T	T		T	T	B										T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																				.	.																															.
Query SS confidence																				.	.																															.
Query Sequence		P	V	Y	I	I	T	E	L	M	A	K	G	S	L	L	E	L	L	.	.	R	D	S	D	E	K	V	L	P	V	S	E	L	L	D	I	A	W	Q	V	A	E	G	M	C	Y	L	E	S	Q	.	N	Y	I	H	R	D	L	A	A	R	N	I	L	V	G	E	N	T	L	C	K	V	G	D	F	G	L	A	R
Query Conservation																				.	.																															.
Alig confidence																				.	.																															.																													.
Template Conservation																																																																																	.
Template Sequence		D	C	W	I	C	M	E	L	M	S	T	S	F	D	K	F	Y	K	Y	V	Y	S	V	L	D	D	V	I	P	E	E	I	L	G	K	I	T	L	A	T	V	K	A	L	N	H	L	K	E	N	L	K	I	I	H	R	D	I	K	P	S	N	I	L	L	D	R	S	G	N	I	K	L	C	D	F	G	I	S	.
Template Known Secondary structure											S	B												T	S																									T	T	S								S	G	G	G	B		B		T	T	S				B				S	G	G	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	K	E	D	V	Y	L	S	H	D	H	N	I	P	Y	K	W	T	A	P	E	A	L	S	R	G	H	Y	S	T	K	S	D	V	W	S	F	G	I	L	L	H	E	M	F	S	R	G	Q	V	P	Y	P	G	M	S	N	H	E	A	F	L	R	V	D	A	G	Y	R	M	P	C	P	L	E	C	P	P	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	L	Y	D	V	R	S	D	V	W	S	L	G	I	T	L	Y	E	L	A	T	.	G	R	F	P	Y	P	D	P	P	.	.	.	.	.	.	.	.	.	.	Q	L	S	N	S	E	E	R	E	F	S	P	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T				T	T																.	S									.	.	.	.	.	.	.	.	.	.					T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	K	L	M	L	T	C	W	C	R	D	P	E	Q	R	P	C	F	K	A	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	N	F	V	N	L	C	L	T	K	D	E	S	K	R	P	K	Y	K	E	L	L	K
Template Known Secondary structure												S	S	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions