Return to main results Retrieve Phyre Job Id

Job DescriptionQ13882
Confidence100.00%DateWed May 9 17:41:40 BST 2012
Rank131Aligned Residues235
% Identity28%Templatec2x7fA_
PDB info PDB header:transferaseChain: A: PDB Molecule:traf2 and nck-interacting protein kinase; PDBTitle: crystal structure of the kinase domain of human traf2- and2 nck-interacting kinase with wee1chk1 inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210. ........220.........230.........240.. .......250........ .260
Predicted Secondary structure 







.









.





....
Query SS confidence 
























.






























.















. . . .

Query Sequence  PREEFTLCRKLGSGYFGEVFEGLWK. DRVQVAIKVISRDNLLHQQMLQSEIQAMKKL. RHKHILALYAVVSVGD. . . . PV
Query Conservation        
   

 
 

 
      .    



 
          
  
   
  
. 




 
 
      ....  
Alig confidence 
























.










.


















.















....

Template Conservation    
 
     

 
 

 
  
        



 
 .           
  

  
     
                 
Template Sequence  PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD. VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNGMDDQL
Template Known Secondary structure 
TTTTTTTT

.

SSTT

STTB







Template Predicted Secondary structure 












.

















Template SS confidence 















































































   21........30.........40.........50....... ..60.........70.........80.........90.........
 
   261........270.........280.........290.........300.........310.........320.........330.........340
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  YIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGLARLIKED
Query Conservation   




   


   
               
  

   
  
     

 

   


       

 





     
Alig confidence 










































































.....
Template Conservation   



    
 
                           
                                   .....
Template Sequence  WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA. . . . .
Template Known Secondary structure 

TTSGGG


TT





SGGG
TT




TTT
.....
Template Predicted Secondary structure 















































.....
Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170......
 
   341........350.........360.........370.........380.........390.........400....... ..410.........
Predicted Secondary structure 





























.





Query SS confidence 


































































.











Query Sequence  VYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMP. CPLECPPSVHKL
Query Conservation              
 


 
     
 










 

 
 
  

       
   
  
 
  . 
   
  
  
Alig confidence  ........











...


















.























.











Template Conservation  ........       

   ...     





 






.
  

           
             
  
  
Template Sequence  . . . . . . . . GTPYWMAPEVIA. . . YDFKSDLWSLGITAIEMAE. GAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSF
Template Known Secondary structure  ........

GGG


...

TT.SS
TTTTS
S




S
S
S
Template Predicted Secondary structure  ........





...







.





















Template SS confidence 















































































   190.........200. ........210.........220 .........230.........240.........250.......
 
   420.........430.........
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  MLTCWCRDPEQRPCFKALRE
Query Conservation 
  
   

  


   
  
Alig confidence 



















Template Conservation 
   
  

  
 
  


 
Template Sequence  IESCLVKNHSQRPATEQLMK
Template Known Secondary structure 

SSGGGS

T
Template Predicted Secondary structure 







Template SS confidence 



















   266...270.........280.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions