Job Description Q13882 Confidence 99.92% Date Wed May 9 17:41:40 BST 2012 Rank 324 Aligned Residues 116 % Identity 21% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	P	H	N	Y	L	A	E	R	E	T	V	E	S	E	P	W	F	F	G	C	I	S	R	S	E	A	V	R	R	L	Q	A	E	G	N	A	T	G	A	F	L	I	R	V	S	E	K	P	S	A	D	Y	V	L	S	V	R	D	T	Q	A	V	R	H	Y	K	I	W	R	R	A	G	G	R	L	H	L	N
Query Conservation
Alig confidence																																					.	.																																				.
Template Conservation																																					.	.																																				.
Template Sequence		M	V	Q	S	S	L	T	E	E	L	K	K	L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	A	N	V	.	.	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R	S	H	G	K	T	L	H	T	R	I	E	H	S	.	N	G	R	F	S	F	Y
Template Known Secondary structure																		T		B			S										T	T	T	S	.	.		T	T								S	S	T	T		S								T	T											.	T	T					T
Template Predicted Secondary structure																																					.	.																																				.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.
					141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	A	V	S	F	L	S	L	P	E	L	V	N	Y	H	R	A	Q	S	L	S	H	G	L	R	L	A	A	P	C	R	K	H	E	P	E	P	L	P
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		E	Q	P	D	V	E	G	H	T	S	I	V	D	L	I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L	P	G	S	A	T	Y	P	V
Template Known Secondary structure		T			S				B	S	S															T						S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions