260 c2vagA_ Probab=100.00  E-value=2e-37  Score=219.85  Aligned_columns=252  Identities=21%

Q ss_pred             CCCHHHEEEEEECCCCCCEEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCE------EEEEEEEEE
Q ss_conf             0475775897402212884899999779--92999999864562169999999999985599847------039983877
Q batch____       185 ERPREEFTLCRKLGSGYFGEVFEGLWKD--RVQVAIKVISRDNLLHQQMLQSEIQAMKKLRHKHI------LALYAVVSV  256 (451)
Q Consensus       185 ei~~~~~~l~~~lG~G~fG~V~~~~~~~--~~~VAvK~l~~~~~~~~~~f~~E~~~l~~l~HpnI------V~l~g~~~~  256 (451)
                      ++-.+.+++.++||+|+||.||+|.++.  ++.||||+++... ...+.+++|+.+|++++|+|+      +.+.+....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~-~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~   87 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH   87 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
T ss_conf             4867825999998762884899999976798399999983990-568999999999998431222331222000012333


Q ss_pred             CCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             89589999888987488976502565431357999999999998630035402013471000121112233223431001
Q batch____       257 GDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGLARL  336 (451)
Q Consensus       257 ~~~~~iVmEy~~~GsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l~~~~~ih~dl~~~nil~~~~~~~ki~DFGlar~  336 (451)
                      ...++++++++. ++....................+..++..++.++|...++|+|+++.|++++.++..++.||+.++.
T Consensus        88 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~  166 (330)
T c2vagA_          88 HGHICIVFELLG-LSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERT  166 (330)
T ss_dssp             TTEEEEEEECCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEE
T ss_pred             CCEECCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCC
T ss_conf             200001221123-6752111222111013656555554455555431101222234554158985788620003454334


Q ss_pred             CCCCCCEEECCEE-----------ECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC---
Q ss_conf             4777502310013-----------02337978996189974689999999999999488999988798999999981---
Q batch____       337 IKEDVYLSHDHNI-----------PYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDA---  402 (451)
Q Consensus       337 ~~~~~~~~~~~~~-----------~~~w~APE~l~~~~~s~ksDVwSfGvil~Ei~t~G~~Pf~~~~~~~v~~~i~~---  402 (451)
                      ...........+.           ...+.+||......++.++|+|++|+++|++.+ ++.|+...+..+.+..+..   
T Consensus       167 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~  245 (330)
T c2vagA_         167 LINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILG  245 (330)
T ss_dssp             ESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHC
T ss_pred             CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCC
T ss_conf             444321000146633267542001210232100000111123542102258731004-8898875896899999985138


Q ss_pred             ----------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             ----------------------------------------8999998568999999999873789678699999999
Q batch____       403 ----------------------------------------GYRMPCPLECPPSVHKLMLTCWCRDPEQRPCFKALRE  439 (451)
Q Consensus       403 ----------------------------------------g~r~~~p~~~p~~l~~li~~C~~~dP~~RPs~~~i~~  439 (451)
                                                              ....+.+..+++++.+||.+||+.||++|||+.+|++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         246 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             89988974420121235465665321000111001233310023565458999999999866588111776789967


