Return to main results Retrieve Phyre Job Id

Job DescriptionQ13882
Confidence99.57%DateWed May 9 17:41:40 BST 2012
Rank453Aligned Residues56
% Identity23%Templatec2j6kE_
PDB info PDB header:protein bindingChain: E: PDB Molecule:cd2-associated protein; PDBTitle: n-terminal sh3 domain of cms (cd2ap human homolog)
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  KYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE
Query Conservation    

          

    
    
       
              
 

 
 
    
Alig confidence 








































....














Template Conservation    



 
      


   

 
 

       
      ....
  
 

  

  
 
Template Sequence  DYIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELN. . . . GRRGMFPDNFVKEIK
Template Known Secondary structure 

S
B

SSTTB

B
TT

SSTTT....TGGG

Template Predicted Secondary structure 
















....



Template SS confidence 



























































   3......10.........20.........30.........40... ......50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions