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Job DescriptionQ13882
Confidence100.00%DateWed May 9 17:41:40 BST 2012
Rank148Aligned Residues240
% Identity26%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EEFTLCRKLGSGYFGEVFEGLWKDRVQ. VAIKVISRDNLLH. . . . . . QQMLQSEIQAMKKLR. . HKHILALYAVVSVGDP
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS
Template Known Secondary structure  TTTTTTGGG



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   260.........270.........280.........290.........300.........310.........320.... .....330........
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Query Sequence  VYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENT. LCKVGDFGLARLIK
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Template Sequence  FVLILERPEPVQDLFDFITERGA. LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK
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   116...120.........130........ .140.........150.........160.........170.........180.........190....
 
   339340.........350.........360... ......370.........380.........390.........400.........410.......
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Query Sequence  EDVYLSHDHNIPYKWTAPEALSRGH. YSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVH
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Template Sequence  DTVYTDFDGT. . RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVSSECQ
Template Known Secondary structure  SS
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   195....200.... .....210.........220.........230....... ..240....... ..250.........260....
 
   418.420.........430.........
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Query Sequence  KLMLTCWCRDPEQRPCFKALRE
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Template Sequence  HLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
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   265....270.........280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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